PDB entry 1kol

View 1kol on RCSB PDB site
Description: Crystal structure of formaldehyde dehydrogenase
Class: oxidoreductase
Keywords: dehydrogenase, OXIDOREDUCTASE
Deposited on 2001-12-21, released 2002-12-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.171
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: formaldehyde dehydrogenase
    Species: Pseudomonas putida [TaxId:303]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46154
      • see remark 999 (138)
    Domains in SCOPe 2.08: d1kola1, d1kola2
  • Chain 'B':
    Compound: formaldehyde dehydrogenase
    Species: Pseudomonas putida [TaxId:303]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46154
      • see remark 999 (138)
    Domains in SCOPe 2.08: d1kolb1, d1kolb2
  • Heterogens: ZN, SO4, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1kolA (A:)
    sgnrgvvylgsgkvevqkidypkmqdprgkkiehgvilkvvstnicgsdqhmvrgrttaq
    vglvlgheitgeviekgrdvenlqigdlvsvpfnvacgrcrsckemhtgvcltvnparag
    gaygyvdmgdwtggqaeyvlvpyadfnllklpdrdkamekirdltclsdilptgyhgavt
    agvgpgstvyvagagpvglaaaasarllgaavvivgdlnparlahakaqgfeiadlsldt
    plheqiaallgepevdcavdavgfearghghegakheapatvlnslmqvtrvagkigipg
    lyvtedpgavdaaakigslsirfglgwakshsfhtgqtpvmkynralmqaimwdriniae
    vvgvqvislddaprgygefdagvpkkfvidphktfsaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kolA (A:)
    gnrgvvylgsgkvevqkidypkmqdprgkkiehgvilkvvstnicgsdqhmvrgrttaqv
    glvlgheitgeviekgrdvenlqigdlvsvpfnvacgrcrsckemhtgvcltvnparagg
    aygyvdmgdwtggqaeyvlvpyadfnllklpdrdkamekirdltclsdilptgyhgavta
    gvgpgstvyvagagpvglaaaasarllgaavvivgdlnparlahakaqgfeiadlsldtp
    lheqiaallgepevdcavdavgfearghghegakheapatvlnslmqvtrvagkigipgl
    yvtedpgavdaaakigslsirfglgwakshsfhtgqtpvmkynralmqaimwdriniaev
    vgvqvislddaprgygefdagvpkkfvidphktfsa
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1kolB (B:)
    sgnrgvvylgsgkvevqkidypkmqdprgkkiehgvilkvvstnicgsdqhmvrgrttaq
    vglvlgheitgeviekgrdvenlqigdlvsvpfnvacgrcrsckemhtgvcltvnparag
    gaygyvdmgdwtggqaeyvlvpyadfnllklpdrdkamekirdltclsdilptgyhgavt
    agvgpgstvyvagagpvglaaaasarllgaavvivgdlnparlahakaqgfeiadlsldt
    plheqiaallgepevdcavdavgfearghghegakheapatvlnslmqvtrvagkigipg
    lyvtedpgavdaaakigslsirfglgwakshsfhtgqtpvmkynralmqaimwdriniae
    vvgvqvislddaprgygefdagvpkkfvidphktfsaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kolB (B:)
    gnrgvvylgsgkvevqkidypkmqdprgkkiehgvilkvvstnicgsdqhmvrgrttaqv
    glvlgheitgeviekgrdvenlqigdlvsvpfnvacgrcrsckemhtgvcltvnparagg
    aygyvdmgdwtggqaeyvlvpyadfnllklpdrdkamekirdltclsdilptgyhgavta
    gvgpgstvyvagagpvglaaaasarllgaavvivgdlnparlahakaqgfeiadlsldtp
    lheqiaallgepevdcavdavgfearghghegakheapatvlnslmqvtrvagkigipgl
    yvtedpgavdaaakigslsirfglgwakshsfhtgqtpvmkynralmqaimwdriniaev
    vgvqvislddaprgygefdagvpkkfvidphktfsa