PDB entry 1kjv
View 1kjv on RCSB PDB site
Description: TAP-B-associated rat MHC class I molecule
Class: immune system
Keywords: Peptide-MHC, Major Histocompatibility Complex
Deposited on
2001-12-05, released
2002-12-18
The last revision prior to the SCOP 1.75 freeze date was dated
2004-01-13, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 1.48 Å
R-factor: 0.164
AEROSPACI score: 0.81
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Mature alpha chain of major histocompatibility complex class I antigen (HEAVY CHAIN)
Species: Rattus norvegicus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1kjva1, d1kjva2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Rattus norvegicus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1kjvb_ - Chain 'P':
Compound: peptide NPR
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1kjvA (A:)
gshslryfdiavsrpglgepryisvgyvddtefarydsdaenrryqprarwmeregpeyw
erntpiykgkeqtfrvnlrtlrgyynqseggshtiqemygcdvgsdgsllrgyeqfaydg
rdyialnedlktwtaadfaarisrnklerdgfadlhraylegecveslrrylelgketll
rsdppkahvtlhprpegdvtlrcwalgfypaditltwqlngedltqdmelvetrpagdgt
fqkwasvvvplgkeqnytcrveheglpkplsqrweplehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1kjvA (A:)
gshslryfdiavsrpglgepryisvgyvddtefarydsdaenrryqprarwmeregpeyw
erntpiykgkeqtfrvnlrtlrgyynqseggshtiqemygcdvgsdgsllrgyeqfaydg
rdyialnedlktwtaadfaarisrnklerdgfadlhraylegecveslrrylelgketll
rsdppkahvtlhprpegdvtlrcwalgfypaditltwqlngedltqdmelvetrpagdgt
fqkwasvvvplgkeqnytcrveheglpkplsqrwep
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1kjvB (B:)
miqktpqiqvysrhppengkpnflncyvsqfhppqieiellkngkkipniemsdlsfskd
wsfyilahteftptetdvyacrvkhvtlkepktvtwdrdm
- Chain 'P':
No sequence available.