PDB entry 1kij

View 1kij on RCSB PDB site
Description: Crystal structure of the 43K ATPase domain of Thermus thermophilus gyrase B in complex with novobiocin
Class: isomerase
Keywords: topoisomerase, gyrase B-coumarin complex, ISOMERASE
Deposited on 2001-12-03, released 2002-06-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.206
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA gyrase subunit b
    Species: THERMUS THERMOPHILUS, synthetic [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kija1, d1kija2
  • Chain 'B':
    Compound: DNA gyrase subunit b
    Species: THERMUS THERMOPHILUS, synthetic [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kijb1, d1kijb2
  • Heterogens: NOV, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1kijA (A:)
    msydasairvlkglegvrhrpamyiggtgvegyhhlfkeildnavdealagyateilvrl
    nedgsltvedngrgipvdlmpeegkpaveviyntlhsggkfeqgaykvsgglhgvgasvv
    nalsewtvvevfregkhhriafsrgevteplrvvgeaprgktgtrvtfkpdpeifgnlrf
    dpskirarlrevaylvaglklvfqdrqhgkeevfldkggvasfakalaegedllyekpfl
    irgthgevevevgflhtqgynaeiltyanmiptrdggthltafksaysralnqyakkagl
    nkekgpqptgddlleglyavvsvklpnpqfegqtkgkllnpeagtavgqvvyerlleile
    enpriakavyekalraaqareaarkarelv
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kijA (A:)
    airvlkglegvrhrpamyiggtgvegyhhlfkeildnavdealagyateilvrlnedgsl
    tvedngrgipvdlmpeegkpaveviyntlhsggkfeqgaykvsgglhgvgasvvnalsew
    tvvevfregkhhriafsrgevteplrvvgeaprgktgtrvtfkpdpeifgnlrfdpskir
    arlrevaylvaglklvfqdrqhgkeevfldkggvasfakalaegedllyekpflirgthg
    evevevgflhtqgynaeiltyanmiptrdggthltafksaysralnqyakkaglnkekgp
    qptgddlleglyavvsvklpnpqfegqtkgkllnpeagtavgqvvyerlleileenpria
    kavyekalraaqareaarkarelv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1kijB (B:)
    msydasairvlkglegvrhrpamyiggtgvegyhhlfkeildnavdealagyateilvrl
    nedgsltvedngrgipvdlmpeegkpaveviyntlhsggkfeqgaykvsgglhgvgasvv
    nalsewtvvevfregkhhriafsrgevteplrvvgeaprgktgtrvtfkpdpeifgnlrf
    dpskirarlrevaylvaglklvfqdrqhgkeevfldkggvasfakalaegedllyekpfl
    irgthgevevevgflhtqgynaeiltyanmiptrdggthltafksaysralnqyakkagl
    nkekgpqptgddlleglyavvsvklpnpqfegqtkgkllnpeagtavgqvvyerlleile
    enpriakavyekalraaqareaarkarelv
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kijB (B:)
    airvlkglegvrhrpamyiggtgvegyhhlfkeildnavdealagyateilvrlnedgsl
    tvedngrgipvdlmpeegkpaveviyntlhsggkfeqgaykvsgglhgvgasvvnalsew
    tvvevfregkhhriafsrgevteplrvvgeaprgktgtrvtfkpdpeifgnlrfdpskir
    arlrevaylvaglklvfqdrqhgkeevfldkggvasfakalaegedllyekpflirgthg
    evevevgflhtqgynaeiltyanmiptrdggthltafksaysralnqyakkaglnkekgp
    qptgddlleglyavvsvklpnpqfegqtkgkllnpeagtavgqvvyerlleileenpria
    kavyekalraaqareaarkarelv