PDB entry 1kdp
View 1kdp on RCSB PDB site
Description: cytidine monophosphate kinase from e. coli in complex with 2'-deoxy-cytidine monophosphate
Class: transferase
Keywords: nucleotide monophosphate kinase, transferase
Deposited on
2001-11-13, released
2002-01-22
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.219
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cytidylate kinase
Species: Escherichia coli [TaxId:562]
Gene: cmk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1kdpa_ - Chain 'B':
Compound: Cytidylate kinase
Species: Escherichia coli [TaxId:562]
Gene: cmk
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1kdpb_ - Heterogens: SO4, C, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1kdpA (A:)
mtaiapvitidgpsgagkgtlckamaealqwhlldsgaiyrvlalaalhhhvdvasedal
vplashldvrfvstngnlevilegedvsgeirtqevanaasqvaafprvreallrrqraf
relpgliadgrdmgtvvfpdapvkifldasseerahrrmlqlqekgfsvnferllaeike
rddrdrnravaplvpaadalvldsttlsieqviekalqyarqklala
Sequence, based on observed residues (ATOM records): (download)
>1kdpA (A:)
aiapvitidgpsgagkgtlckamaealqwhlldsgaiyrvlalaalhhhvdvasedalvp
lashldvrfvstngnlevilegedvsgeirtqevanaasqvaafprvreallrrqrafre
lpgliadgrdmgtvvfpdapvkifldasseerahrrmlqlqekgfsvnferllaeikerd
drdrnravaplvpaadalvldsttlsieqviekalqyarqkla
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1kdpB (B:)
mtaiapvitidgpsgagkgtlckamaealqwhlldsgaiyrvlalaalhhhvdvasedal
vplashldvrfvstngnlevilegedvsgeirtqevanaasqvaafprvreallrrqraf
relpgliadgrdmgtvvfpdapvkifldasseerahrrmlqlqekgfsvnferllaeike
rddrdrnravaplvpaadalvldsttlsieqviekalqyarqklala
Sequence, based on observed residues (ATOM records): (download)
>1kdpB (B:)
aiapvitidgpsgagkgtlckamaealqwhlldsgaiyrvlalaalhhhvdvasedalvp
lashldvrfvstngnlevilegedvsgeirtqevanaasqvaafprvreallrrqrafre
lpgliadgrdmgtvvfpdapvkifldasseerahrrmlqlqekgfsvnferllaeikerd
drdrnravaplvpaadalvldsttlsieqviekalqyarqkla