PDB entry 1kd7

View 1kd7 on RCSB PDB site
Description: Crystal structure of an extracellular domain fragment of human BAFF
Class: membrane protein
Keywords: beta-sheet shandwich, TNF, MEMBRANE PROTEIN
Deposited on 2001-11-12, released 2002-11-12
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.217
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7a_
  • Chain 'B':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7b_
  • Chain 'C':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7c_
  • Chain 'K':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7k_
  • Chain 'L':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7l_
  • Chain 'M':
    Compound: tumor necrosis factor ligand superfamily member 13b
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1kd7m_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1kd7A (A:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7A (A:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1kd7B (B:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7B (B:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1kd7C (C:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7C (C:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >1kd7K (K:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7K (K:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1kd7L (L:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7L (L:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll
    

  • Chain 'M':
    Sequence, based on SEQRES records: (download)
    >1kd7M (M:)
    eqkliseedlnkelqgpeetvtqdclqliadsetptiqkgsytfvpwllsfkrgsaleek
    enkilvketgyffiygqvlytdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlp
    nnscysagiakleegdelqlaiprenaqisldgdvtffgalkll
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kd7M (M:)
    vtqdclqliadsetptiqkgsytfvpwllsfkrgsaleekenkilvketgyffiygqvly
    tdktyamghliqrkkvhvfgdelslvtlfrciqnmpetlpnnscysagiakleegdelql
    aiprenaqisldgdvtffgalkll