PDB entry 1jv1

View 1jv1 on RCSB PDB site
Description: crystal structure of human agx1 complexed with udpglcnac
Class: transferase
Keywords: nucleotidyltransferase, alternative splicing
Deposited on 2001-08-28, released 2002-08-28
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.183
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GlcNAc1P uridyltransferase isoform 1: AGX1
    Species: Homo sapiens [TaxId:9606]
    Gene: UAP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16222 (0-End)
      • see remark 999 (444)
    Domains in SCOPe 2.06: d1jv1a_
  • Chain 'B':
    Compound: GlcNAc1P uridyltransferase isoform 1: AGX1
    Species: Homo sapiens [TaxId:9606]
    Gene: UAP1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q16222
      • see remark 999 (444)
    Domains in SCOPe 2.06: d1jv1b_
  • Heterogens: UD1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1jv1A (A:)
    mnindlkltlskagqehllrfwneleeaqqvelyaelqamnfeelnfffqkaiegfnqss
    hqknvdarmepvprevlgsatrdqdqlqaweseglfqisqnkvavlllaggqgtrlgvay
    pkgmydvglpsrktlfqiqaerilklqqvaekyygnkciipwyimtsgrtmestkefftk
    hkyfglkkenviffqqgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedme
    qrgiwsihvycvdnilvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyq
    vveyseislataqkrssdgrllfnagnianhfftvpflrdvvnvyepqlqhhvaqkkipy
    vdtqgqlikpdkpngikmekfvfdifqfakkfvvyevlredefsplknadsqngkdnptt
    arhalmslhhcwvlnagghfidengsrlpaiprlkdandvpiqceisplisyageglesy
    vadkefhapliidengvhelvkngi
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jv1A (A:)
    mnindlkltlskagqehllrfwneleeaqqvelyaelqamnfeelnfffqkaiegfrmep
    vprevlgsatrdqdqlqaweseglfqisqnkvavlllaggqgtrlgvaypkgmydvglps
    rktlfqiqaerilklqqvaekyygnkciipwyimtsgrtmestkefftkhkyfglkkenv
    iffqqgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedmeqrgiwsihvyc
    vdnilvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyqvveyseislat
    aqkrssdgrllfnagnianhfftvpflrdvvnvyepqlqhhvaqkkipyvdtqgqlikpd
    kpngikmekfvfdifqfakkfvvyevlredefsplknadsqngkdnpttarhalmslhhc
    wvlnagghfidengsrlpaiprlkdandvpiqceisplisyageglesyvadkefhapli
    idengvhelv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1jv1B (B:)
    mnindlkltlskagqehllrfwneleeaqqvelyaelqamnfeelnfffqkaiegfnqss
    hqknvdarmepvprevlgsatrdqdqlqaweseglfqisqnkvavlllaggqgtrlgvay
    pkgmydvglpsrktlfqiqaerilklqqvaekyygnkciipwyimtsgrtmestkefftk
    hkyfglkkenviffqqgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedme
    qrgiwsihvycvdnilvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyq
    vveyseislataqkrssdgrllfnagnianhfftvpflrdvvnvyepqlqhhvaqkkipy
    vdtqgqlikpdkpngikmekfvfdifqfakkfvvyevlredefsplknadsqngkdnptt
    arhalmslhhcwvlnagghfidengsrlpaiprlkdandvpiqceisplisyageglesy
    vadkefhapliidengvhelvkngi
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jv1B (B:)
    indlkltlskagqehllrfwneqvelyaelqamnfeelnfffqkaiegfvdarmepvpre
    vlgsatrdqdqlqaweseglfqisqnkvavlllaggqgtrlgvaypkgmydvglpsrktl
    fqiqaerilklqqvaekyygnkciipwyimtsgrtmestkefftkhkyfglkkenviffq
    qgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedmeqrgiwsihvycvdni
    lvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyqvveyseislataqkr
    ssdgrllfnagnianhfftvpflrdvvnvyepqlqhhvaqkkipyvdtqgqlikpdkpng
    ikmekfvfdifqfakkfvvyevlredefsplknadsqngkdnpttarhalmslhhcwvln
    agghfidengsrlpaiprlkdandvpiqceisplisyageglesyvadkefhapliiden
    gvhel