PDB entry 1jtz

View 1jtz on RCSB PDB site
Description: crystal structure of trance/rankl cytokine.
Class: cytokine
Keywords: tumor necrosis factor superfamily member, jellyroll, beta-sandwich, cytokine
Deposited on 2001-08-23, released 2001-09-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.235
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'X':
    Compound: tumor necrosis factor ligand superfamily member 11
    Species: Mus musculus [TaxId:10090]
    Gene: RANKL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1jtzx_
  • Chain 'Y':
    Compound: tumor necrosis factor ligand superfamily member 11
    Species: Mus musculus [TaxId:10090]
    Gene: RANKL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1jtzy_
  • Chain 'Z':
    Compound: tumor necrosis factor ligand superfamily member 11
    Species: Mus musculus [TaxId:10090]
    Gene: RANKL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1jtzz_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'X':
    Sequence, based on SEQRES records: (download) 
    >1jtzX (X:)
gplgspefprrgkpeaqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngkl
rvnqdgfyylyanicfrhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsg
nsefhfysinvggffklrageeisiqvsnpslldpdqdatyfgafkvqdid

    Sequence, based on observed residues (ATOM records): (download) 
    >1jtzX (X:)
qpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyylyanicf
rhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinvggffk
lrageeisiqvsnpslldpdqdatyfgafkvqdid

  • Chain 'Y':
    Sequence, based on SEQRES records: (download) 
    >1jtzY (Y:)
gplgspefprrgkpeaqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngkl
rvnqdgfyylyanicfrhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsg
nsefhfysinvggffklrageeisiqvsnpslldpdqdatyfgafkvqdid

    Sequence, based on observed residues (ATOM records): (download) 
    >1jtzY (Y:)
qpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyylyanicf
rhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinvggffk
lrageeisiqvsnpslldpdqdatyfgafkvqdid

  • Chain 'Z':
    Sequence, based on SEQRES records: (download) 
    >1jtzZ (Z:)
gplgspefprrgkpeaqpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngkl
rvnqdgfyylyanicfrhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsg
nsefhfysinvggffklrageeisiqvsnpslldpdqdatyfgafkvqdid

    Sequence, based on observed residues (ATOM records): (download) 
    >1jtzZ (Z:)
qpfahltinaasipsgshkvtlsswyhdrgwakisnmtlsngklrvnqdgfyylyanicf
rhhetsgsvptdylqlmvyvvktsikipsshnlmkggstknwsgnsefhfysinvggffk
lrageeisiqvsnpslldpdqdatyfgafkvqdid