PDB entry 1jto

View 1jto on RCSB PDB site
Description: Degenerate interfaces in antigen-antibody complexes
Class: Antibody,Hydrolase
Keywords: immunoglobulin, heavy chain antibody, VHH, interface, binding, Antibody,Hydrolase
Deposited on 2001-08-21, released 2001-10-31
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.173
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vh Single-Domain Antibody
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed):
    • GB 2392447
    Domains in SCOPe 2.07: d1jtoa_
  • Chain 'B':
    Compound: Vh Single-Domain Antibody
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed):
    • GB 2392447
    Domains in SCOPe 2.07: d1jtob_
  • Chain 'L':
    Compound: lysozyme
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jtol_
  • Chain 'M':
    Compound: lysozyme
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jtom_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jtoA (A:)
dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
dswgqgtqvtvssgrypydvpdygsgra

    Sequence, based on observed residues (ATOM records): (download) 
    >1jtoA (A:)
vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
swgqgtqvtvss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jtoB (B:)
dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
dswgqgtqvtvssgrypydvpdygsgra

    Sequence, based on observed residues (ATOM records): (download) 
    >1jtoB (B:)
vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
swgqgtqvtvss

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jtoL (L:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jtoM (M:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl