PDB entry 1jto
View 1jto on RCSB PDB site
Description: Degenerate interfaces in antigen-antibody complexes
Class: Antibody,Hydrolase
Keywords: immunoglobulin, heavy chain antibody, VHH, interface, binding, Antibody,Hydrolase
Deposited on
2001-08-21, released
2001-10-31
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.173
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Vh Single-Domain Antibody
Species: Camelus dromedarius [TaxId:9838]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1jtoa_ - Chain 'B':
Compound: Vh Single-Domain Antibody
Species: Camelus dromedarius [TaxId:9838]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1jtob_ - Chain 'L':
Compound: lysozyme
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1jtol_ - Chain 'M':
Compound: lysozyme
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1jtom_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1jtoA (A:)
dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
dswgqgtqvtvssgrypydvpdygsgra
Sequence, based on observed residues (ATOM records): (download)
>1jtoA (A:)
vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
swgqgtqvtvss
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1jtoB (B:)
dvqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityy
adsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygy
dswgqgtqvtvssgrypydvpdygsgra
Sequence, based on observed residues (ATOM records): (download)
>1jtoB (B:)
vqlqasgggsvqaggslrlscaasgytigpycmgwfrqapgkeregvaainmgggityya
dsvkgrftisqdnakntvyllmnslepedtaiyycaadstiyasyyecghglstggygyd
swgqgtqvtvss
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1jtoL (L:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl
- Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)
>1jtoM (M:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl