PDB entry 1jsh

View 1jsh on RCSB PDB site
Description: crystal structure of h9 haemagglutinin complexed with lsta receptor analog
Class: Viral protein
Keywords: influenza, fusion protein, receptor complex
Deposited on 2001-08-17, released 2001-09-26
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.2
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: haemagglutinin (ha1 chain)
    Species: INFLUENZA A VIRUS
    Domains in SCOP 1.75: d1jsha_
  • Chain 'B':
    Compound: haemagglutinin (ha2 chain)
    Species: INFLUENZA A VIRUS
    Domains in SCOP 1.75: d1jshb_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jshA (A:)
dkicigyqstnstetvdtltetnvpvthakellhtshngmlcatnlghplildtctiegl
iygnpscdlllggrewsyiverpsavngmcypgnvenleelrslfssassyqriqifpdt
iwnvsysgtssacsdsfyrsmrwltqknnaypiqdaqytnnrgksilfmwginhpptdtv
qtnlytrtdtttsvttedinrtfkpvigprplvnglhgridyywsvlkpgqtlrvrsngn
liapwyghilsgeshgrilktdlnsgncvvqcqtergglnttlpfhnvskyafgncpkyv
gvkslklavglrnvparss

    Sequence, based on observed residues (ATOM records): (download) 
    >1jshA (A:)
dkicigyqstnstetvdtltetnvpvthakellhtshngmlcatnlghplildtctiegl
iygnpscdlllggrewsyiverpsavngmcypgnvenleelrslfssassyqriqifpdt
iwnvsysgtssacsdsfyrsmrwltqknnaypiqdaqytnnrgksilfmwginhpptdtv
qtnlytrtdtttsvttedinrtfkpvigprplvnglhgridyywsvlkpgqtlrvrsngn
liapwyghilsgeshgrilktdlnsgncvvqcqtergglnttlpfhnvskyafgncpkyv
gvkslklavglrnvpar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jshB (B:)
glfgaiagfieggwpglvagwygfqhsndqgvgmaadsdstqkaidkitskvnnivdkmn
kqygiidhefseietrlnminnkiddqiqdiwtynaellvllenqktldehdanvnnlyn
kvkralgsnamedgkgcfelyhkcddqcmetirngtynrrkykeesklerqkiegi

    Sequence, based on observed residues (ATOM records): (download) 
    >1jshB (B:)
glfgaiagfieggwpglvagwygfqhsndqgvgmaadsdstqkaidkitskvnnivdkmn
kqygiidhefseietrlnminnkiddqiqdiwtynaellvllenqktldehdanvnnlyn
kvkralgsnamedgkgcfelyhkcddqcmetirngtynrr