PDB entry 1jsd
View 1jsd on RCSB PDB site
Description: crystal structure of swine h9 haemagglutinin
Class: Viral protein
Keywords: influenza, Viral protein
Deposited on
2001-08-17, released
2001-09-26
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.218
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: haemagglutinin (ha1 chain)
Species: Influenza A virus (A/swine/Hong Kong/9/98(H9N2)) [TaxId:145307]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1jsda_ - Chain 'B':
Compound: haemagglutinin (ha2 chain)
Species: Influenza A virus (A/swine/Hong Kong/9/98(H9N2)) [TaxId:145307]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1jsdb_ - Heterogens: NAG, PO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1jsdA (A:)
dkicigyqstnstetvdtltetnvpvthakellhtshngmlcatnlghplildtctiegl
iygnpscdlllggrewsyiverpsavngmcypgnvenleelrslfssassyqriqifpdt
iwnvsysgtssacsdsfyrsmrwltqknnaypiqdaqytnnrgksilfmwginhpptdtv
qtnlytrtdtttsvttedinrtfkpvigprplvnglhgridyywsvlkpgqtlrvrsngn
liapwyghilsgeshgrilktdlnsgncvvqcqtergglnttlpfhnvskyafgncpkyv
gvkslklavglrnvparss
Sequence, based on observed residues (ATOM records): (download)
>1jsdA (A:)
dkicigyqstnstetvdtltetnvpvthakellhtshngmlcatnlghplildtctiegl
iygnpscdlllggrewsyiverpsavngmcypgnvenleelrslfssassyqriqifpdt
iwnvsysgtssacsdsfyrsmrwltqknnaypiqdaqytnnrgksilfmwginhpptdtv
qtnlytrtdtttsvttedinrtfkpvigprplvnglhgridyywsvlkpgqtlrvrsngn
liapwyghilsgeshgrilktdlnsgncvvqcqtergglnttlpfhnvskyafgncpkyv
gvkslklavglrnvpar
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1jsdB (B:)
glfgaiagfieggwpglvagwygfqhsndqgvgmaadsdstqkaidkitskvnnivdkmn
kqygiidhefseietrlnminnkiddqiqdiwtynaellvllenqktldehdanvnnlyn
kvkralgsnamedgkgcfelyhkcddqcmetirngtynrrkykeesklerqkiegi
Sequence, based on observed residues (ATOM records): (download)
>1jsdB (B:)
glfgaiagfieggwpglvagwygfqhsndqgvgmaadsdstqkaidkitskvnnivdkmn
kqygiidhefseietrlnminnkiddqiqdiwtynaellvllenqktldehdanvnnlyn
kvkralgsnamedgkgcfelyhkcddqcmetirngtynrr