PDB entry 1jrk
View 1jrk on RCSB PDB site
Description: Crystal Structure of a Nudix Protein from Pyrobaculum aerophilum Reveals a Dimer with Intertwined Beta Sheets
Class: structural genomics, unknown function
Keywords: Nudix/mutT-like fold, mixed alpha/beta, tetramerization due to Hix6x tag, putative Nudix hydrolase, structural genomics, UNKNOWN FUNCTION
Deposited on
2001-08-13, released
2002-04-03
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.19
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nudix homolog
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1jrka1, d1jrka2 - Chain 'B':
Compound: Nudix homolog
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1jrkb1, d1jrkb2 - Chain 'C':
Compound: Nudix homolog
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1jrkc1, d1jrkc2 - Chain 'D':
Compound: Nudix homolog
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1jrkd1, d1jrkd2 - Heterogens: MPD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1jrkA (A:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1jrkA (A:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaa
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1jrkB (B:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1jrkB (B:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaa
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1jrkC (C:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1jrkC (C:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaa
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1jrkD (D:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1jrkD (D:)
mivtsgvlvengkvllvkhkrlgvyiypgghvehnetpieavkrefeeetgivvepigft
ygiidenaverpmplvileevvkypeethihfdliylvkrvggdlkngewidvreidrie
tfpnvrkvvslalstlyrlgkisklaaale