PDB entry 1jpn

View 1jpn on RCSB PDB site
Description: GMPPNP Complex of SRP GTPase NG Domain
Class: signaling protein
Keywords: Ffh, SRP, GMPPNP, Signal Recognition Particle, SRP54, NG domain, SIGNALING PROTEIN
Deposited on 2001-08-02, released 2002-02-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.19
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: signal recognition particle protein
    Species: Thermus aquaticus [TaxId:271]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jpna1, d1jpna2
  • Chain 'B':
    Compound: signal recognition particle protein
    Species: Thermus aquaticus [TaxId:271]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jpnb1, d1jpnb2
  • Heterogens: CA, GNP, ACY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jpnA (A:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmgd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jpnB (B:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmgd

    Sequence, based on observed residues (ATOM records): (download) 
    >1jpnB (B:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmg