PDB entry 1jpn
View 1jpn on RCSB PDB site
Description: GMPPNP Complex of SRP GTPase NG Domain
Class: signaling protein
Keywords: Ffh, SRP, GMPPNP, Signal Recognition Particle, SRP54, NG domain
Deposited on
2001-08-02, released
2002-02-02
The last revision prior to the SCOP 1.73 freeze date was dated
2002-02-02, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.19
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: signal recognition particle protein
Species: Thermus aquaticus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1jpna1, d1jpna2 - Chain 'B':
Compound: signal recognition particle protein
Species: Thermus aquaticus
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1jpnb1, d1jpnb2 - Heterogens: CA, GNP, ACY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1jpnA (A:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmgd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1jpnB (B:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmgd
Sequence, based on observed residues (ATOM records): (download)
>1jpnB (B:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgmg