PDB entry 1jou

View 1jou on RCSB PDB site
Description: Crystal Structure of Native S195A Thrombin with an Unoccupied Active Site
Class: blood clotting
Keywords: protease, proteinase, thrombin, factor IIa, enzyme, BLOOD CLOTTING
Deposited on 2001-07-31, released 2001-08-10
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.222
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thrombin, light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1jou.1
  • Chain 'B':
    Compound: Thrombin, heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00734 (0-258)
      • engineered (204)
    Domains in SCOPe 2.04: d1jou.1
  • Chain 'C':
    Compound: Thrombin, light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1jou.2
  • Chain 'D':
    Compound: Thrombin, heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00734 (0-End)
      • engineered (204)
    Domains in SCOPe 2.04: d1jou.2
  • Chain 'E':
    Compound: Thrombin, light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1jou.3
  • Chain 'F':
    Compound: Thrombin, heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00734 (0-258)
      • engineered (204)
    Domains in SCOPe 2.04: d1jou.3
  • Heterogens: NDG, NA, GOL, ACY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1jouA (A:)
    tatseyqtffnprtfgsgeadcglrplfekksledkterellesyidgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jouA (A:)
    seyqtffnprtfgsgeadcglrplfekksledkterellesyidg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jouB (B:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdaggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqfge
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1jouC (C:)
    tatseyqtffnprtfgsgeadcglrplfekksledkterellesyidgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jouC (C:)
    tseyqtffnprtfgsgeadcglrplfekksledkterellesyidgr
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1jouD (D:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdaggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqfge
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jouD (D:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdaggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqf
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1jouE (E:)
    tatseyqtffnprtfgsgeadcglrplfekksledkterellesyidgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jouE (E:)
    seyqtffnprtfgsgeadcglrplfekksledkterellesyidgr
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jouF (F:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdaggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqfge