PDB entry 1jn9

View 1jn9 on RCSB PDB site
Description: Structure of Putative Asparaginase Encoded by Escherichia coli ybiK Gene
Class: hydrolase
Keywords: Ntn hydrolase, asparaginase, autoproteolysis, HYDROLASE
Deposited on 2001-07-23, released 2003-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.17
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative L-asparaginase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37595 (0-End)
      • modified residue (61)
    Domains in SCOPe 2.08: d1jn9.1
  • Chain 'B':
    Compound: Putative L-asparaginase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1jn9.1
  • Chain 'C':
    Compound: Putative L-asparaginase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37595 (0-End)
      • modified residue (61)
    Domains in SCOPe 2.08: d1jn9.2
  • Chain 'D':
    Compound: Putative L-asparaginase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1jn9.2
  • Heterogens: NA, CL, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jn9A (A:)
gkaviaihggagaisraqmslqqelryiealsaivetgqkmleagesaldvvteavrlle
ecplfnagigavftrdetheldacvmdgntlkagavagvshlrnpvlaarlvmeqsphvm
migegaenfafargmervspeifstslryeqllaarkegatvldhsgapldekqkmg

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn9A (A:)
gkaviaihggagaisraqmslqqelryiealsaivetgqkmleagesaldvvteavrlle
ecplfnagigavftrdetheldacvmdgntlkagavagvshlrnpvlaarlvmeqsphvm
migegaenfafargmervspeifstslryeqllaarke

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jn9B (B:)
tvgavaldldgnlaaatstggmtnklpgrvgdsplvgagcyannasvavsctgtgevfir
alaaydiaalmdygglslaeacervvmeklpalggsggliaidhegnvalpfntegmyra
wgyagdtpttgiyrekgdtvatq

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn9B (B:)
tvgavaldldgnlaaatstggmtnklpgrvgdsplvgagcyannasvavsctgtgevfir
alaaydiaalmdygglslaeacervvmeklpalggsggliaidhegnvalpfntegmyra
wgyagdtpttgiyr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1jn9C (C:)
gkaviaihggagaisraqmslqqelryiealsaivetgqkmleagesaldvvteavrlle
ecplfnagigavftrdetheldacvmdgntlkagavagvshlrnpvlaarlvmeqsphvm
migegaenfafargmervspeifstslryeqllaarkegatvldhsgapldekqkmg

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn9C (C:)
gkaviaihggagaisraqmslqqelryiealsaivetgqkmleagesaldvvteavrlle
ecplfnagigavftrdetheldacvmdgntlkagavagvshlrnpvlaarlvmeqsphvm
migegaenfafargmervspeifstslryeqllaark

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1jn9D (D:)
tvgavaldldgnlaaatstggmtnklpgrvgdsplvgagcyannasvavsctgtgevfir
alaaydiaalmdygglslaeacervvmeklpalggsggliaidhegnvalpfntegmyra
wgyagdtpttgiyrekgdtvatq

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn9D (D:)
tvgavaldldgnlaaatstggmtnklpgrvgdsplvgagcyannasvavsctgtgevfir
alaaydiaalmdygglslaeacervvmeklpalggsggliaidhegnvalpfntegmyra
wgyagdtpttgiyre