PDB entry 1jn6

View 1jn6 on RCSB PDB site
Description: Crystal Structure of Fab-Estradiol Complexes
Class: immune system
Keywords: igg fold, antibody-hapten complex, estradiol, immune system
Deposited on 2001-07-23, released 2002-02-06
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.223
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: monoclonal anti-estradiol 10g6d6 immunoglobulin lambda chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB AAK01086 (0-107)
    • GB AAC52488 (Start-209)
    Domains in SCOPe 2.01: d1jn6a1, d1jn6a2
  • Chain 'B':
    Compound: monoclonal anti-estradiol 10g6d6 immunoglobulin gamma-1 chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB AAK01087 (0-212)
    • GB AAC52820 (213-217)
    Domains in SCOPe 2.01: d1jn6b1, d1jn6b2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jn6A (A:)
qavvtqesalttspgetvtltcrsssgaittshyanwiqekpdhlftglisgtnnrapgv
parfsgsligdkaaltitgaqtedeaiyicalwfsnqfifgsgtkvtvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtveksls

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn6A (A:)
qavvtqesalttspgetvtltcrsssgaittshyanwiqekpdhlftglisgtnnrapgv
parfsgsligdkaaltitgaqtedeaiyicalwfsnqfifgsgtkvtvksspsvtlfpps
seeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassyltlt
arawerhssyscqvtheghtveksls

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jn6B (B:)
evqlqqsgaelarpgasvklscrtsgysfttywmqwvrqrpgqglewiaaiypgdddary
tqkfkgkatltadrsssivylqlnsltsedsavyscsrgrslyytmdywgqgtsvtvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvswntgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivp

    Sequence, based on observed residues (ATOM records): (download) 
    >1jn6B (B:)
evqlqqsgaelarpgasvklscrtsgysfttywmqwvrqrpgqglewiaaiypgdddary
tqkfkgkatltadrsssivylqlnsltsedsavyscsrgrslyytmdywgqgtsvtvttp
psvyplapgsaaqtnsmvtlgclvkgyfpepvtvswntgslssgvhtfpavlqsdlytls
ssvtvpsstwpsetvtcnvahpasstkvdkkivp