PDB entry 1jkg

View 1jkg on RCSB PDB site
Description: Structural basis for the recognition of a nucleoporin FG-repeat by the NTF2-like domain of TAP-p15 mRNA nuclear export factor
Class: transport protein
Keywords: NTF2-like domain, TRANSPORT PROTEIN
Deposited on 2001-07-12, released 2001-10-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.219
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p15
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1jkga_
  • Chain 'B':
    Compound: tap
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBU9 (1-End)
      • cloning artifact (0)
    Domains in SCOPe 2.06: d1jkgb1, d1jkgb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1jkgA (A:)
masvdfktyvdqacraaeefvnvyyttmdkrrrllsrlymgtatlvwngnavsgqeslse
ffemlpssefqisvvdcqpvhdeatpsqttvlvvicgsvkfegnkqrdfnqnfiltaqas
psntvwkiasdcfrfqdwas

    Sequence, based on observed residues (ATOM records): (download) 
    >1jkgA (A:)
asvdfktyvdqacraaeefvnvyyttmdkrrrllsrlymgtatlvwngnavsgqeslsef
femlpssefqisvvdcqpvhdeatpsqttvlvvicgsvkfegnkqrdfnqnfiltaqasp
sntvwkiasdcfrfqdwas

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1jkgB (B:)
appckgsyfgtenlkslvlhflqqyyaiydsgdrqglldayhdgaccslsipfipqnpar
sslaeyfkdsrnvkklkdptlrfrllkhtrlnvvaflnelpktqhdvnsfvvdisaqtst
llcfsvngvfkevdgksrdslraftrtfiavpasnsglcivndelfvrnasseeiqrafa
mpaptpssspvptlspeqqemlqafstqsgmnlewsqkclqdnnwdytrsaqafthlkak
geipevafmk

    Sequence, based on observed residues (ATOM records): (download) 
    >1jkgB (B:)
appckgsyfgtenlkslvlhflqqyyaiydsgdrqglldayhdgaccslsipfisslaey
fkdsrnvkklkdptlrfrllkhtrlnvvaflnelpktqhdvnsfvvdisaqtstllcfsv
ngvfkevdgksrdslraftrtfiavpasnsglcivndelfvrnasseeiqrafampaptp