PDB entry 1jdx
View 1jdx on RCSB PDB site
Description: crystal structure of human l-arginine:glycine amidinotransferase in complex with l-norvaline
Class: transferase
Keywords: creatine biosynthesis, catalytic triad, reaction mechanism, novel fold, fivefold pseudosymmetry, transferase
Deposited on
1998-10-12, released
1999-02-09
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.177
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (l-arginine:glycine amidinotransferase)
Species: Homo sapiens [TaxId:9606]
Gene: AT38H
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1jdxa_ - Heterogens: NVA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1jdxA (A:)
stqaatassrnscaaddkateplpkdcpvssynewdpleevivgraenacvppftievka
ntyekywpfyqkqgghyfpkdhlkkavaeieemcnilktegvtvrrpdpidwslkyktpd
festglysamprdilivvgneiieapmawrsrffeyrayrsiikdyfhrgakwttapkpt
madelynqdypihsvedrhklaaqgkfvttefepcfdaadfiragrdifaqrsqvtnylg
iewmrrhlapdyrvhiisfkdpnpmhidatfniigpgivlsnpdrpchqidlfkkagwti
itpptpiipddhplwmsskwlsmnvlmldekrvmvdanevpiqkmfeklgittikvnirn
anslgggfhcwtcdvrrrgtlqsyld
Sequence, based on observed residues (ATOM records): (download)
>1jdxA (A:)
cpvssynewdpleevivgraenacvppftievkantyekywpfyqkqgghyfpkdhlkka
vaeieemcnilktegvtvrrpdpidwslkyktpdfestglysamprdilivvgneiieap
mawrsrffeyrayrsiikdyfhrgakwttapkptmadelynqdypihsvedrhklaaqgk
fvttefepcfdaadfiragrdifaqrsqvtnylgiewmrrhlapdyrvhiisfkdpnpmh
idatfniigpgivlsnpdrpchqidlfkkagwtiitpptpiipddhplwmsskwlsmnvl
mldekrvmvdanevpiqkmfeklgittikvnirnanslgggfhcwtcdvrrrgtlqsyld