PDB entry 1jcd

View 1jcd on RCSB PDB site
Description: Crystal Structure of a Novel Alanine-Zipper Trimer at 1.3 A Resolution, I6A,L9A,V13A,L16A,V20A,L23A,V27A,M30A,V34A,L48A,M51A mutations
Class: membrane protein
Keywords: lipoprotein, protein folding, coiled coil, helix capping, alanine-zipper, membrane protein
Deposited on 2001-06-08, released 2003-06-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: major outer membrane lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69776 (Start-51)
      • engineered (5)
      • engineered (8)
      • engineered (12)
      • engineered (15)
      • engineered (19)
      • engineered (22)
      • engineered (26)
      • engineered (29)
      • engineered (33)
      • engineered (47)
      • engineered (50)
    Domains in SCOPe 2.08: d1jcda_
  • Chain 'B':
    Compound: major outer membrane lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69776 (0-51)
      • engineered (5)
      • engineered (8)
      • engineered (12)
      • engineered (15)
      • engineered (19)
      • engineered (22)
      • engineered (26)
      • engineered (29)
      • engineered (33)
      • engineered (47)
      • engineered (50)
    Domains in SCOPe 2.08: d1jcdb_
  • Chain 'C':
    Compound: major outer membrane lipoprotein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P69776 (Start-51)
      • engineered (5)
      • engineered (8)
      • engineered (12)
      • engineered (15)
      • engineered (19)
      • engineered (22)
      • engineered (26)
      • engineered (29)
      • engineered (33)
      • engineered (47)
      • engineered (50)
    Domains in SCOPe 2.08: d1jcdc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1jcdA (A:)
    ssnakadqassdaqtanakadqasndanaarsdaqaakddaaranqradnaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jcdA (A:)
    nakadqassdaqtanakadqasndanaarsdaqaakddaaranqradnaa
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jcdB (B:)
    ssnakadqassdaqtanakadqasndanaarsdaqaakddaaranqradnaa
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1jcdC (C:)
    ssnakadqassdaqtanakadqasndanaarsdaqaakddaaranqradnaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jcdC (C:)
    nakadqassdaqtanakadqasndanaarsdaqaakddaaranqradnaa