PDB entry 1jb0

View 1jb0 on RCSB PDB site
Description: Crystal Structure of Photosystem I: a Photosynthetic Reaction Center and Core Antenna System from Cyanobacteria
Class: photosynthesis
Keywords: membrane protein, multiprotein-pigment complex, photosynthesis
Deposited on 2001-06-01, released 2001-08-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-05-11, with a file datestamp of 2016-05-06.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: photosystem I p700 chlorophyll a apoprotein a1
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0a_
  • Chain 'B':
    Compound: photosystem I p700 chlorophyll a apoprotein a2
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0b_
  • Chain 'C':
    Compound: photosystem I iron-sulfur center
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0c_
  • Chain 'D':
    Compound: photosystem 1 reaction centre subunit II
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0d_
  • Chain 'E':
    Compound: photosystem 1 reaction centre subunit IV
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0e_
  • Chain 'F':
    Compound: photosystem 1 reaction centre subunit III
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0f_
  • Chain 'I':
    Compound: photosystem 1 reaction centre subunit viii
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0i_
  • Chain 'J':
    Compound: photosystem 1 reaction centre subunit ix
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0j_
  • Chain 'K':
    Compound: photosystem 1 reaction centre subunit x
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0k_
  • Chain 'L':
    Compound: photosystem 1 reaction centre subunit xi
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25902 (Start-142)
      • conflict (45)
      • see remark 999 (143-153)
    Domains in SCOPe 2.07: d1jb0l_
  • Chain 'M':
    Compound: photosystem 1 reaction centre subunit xii
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1jb0m_
  • Chain 'X':
    Compound: photosystem I subunit psax
    Species: Synechococcus elongatus [TaxId:32046]
    Database cross-references and differences (RAF-indexed):
    • PDB 1JB0 (Start-34)
    Domains in SCOPe 2.07: d1jb0x_
  • Heterogens: CA, CLA, PQN, SF4, BCR, LHG, LMG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1jb0A (A:)
    mtispperepkvrvvvdndpvptsfekwakpghfdrtlargpqtttwiwnlhalahdfdt
    htsdledisrkifsahfghlavvfiwlsgmyfhgakfsnyeawladptgikpsaqvvwpi
    vgqgilngdvgggfhgiqitsglfqlwrasgitnefqlyctaigglvmaglmlfagwfhy
    hkrapklewfqnvesmlnhhlagllglgslawaghqihvslpinklldagvaakdiplph
    efilnpslmaelypkvdwgffsgvipfftfnwaaysdfltfngglnpvtgglwlsdtahh
    hlaiavlfiiaghmyrtnwgighslkeileahkgpftgaghkglyevlttswhaqlainl
    ammgslsiivaqhmyamppypylatdyptqlslfthhmwiggflvvggaahgaifmvrdy
    dpamnqnnvldrvlrhrdaiishlnwvciflgfhsfglyvhndtmrafgrpqdmfsdtgi
    qlqpvfaqwvqnlhtlapggtapnaaatasvafggdvvavggkvammpivlgtadfmvhh
    ihaftihvtvlillkgvlfarssrlipdkanlgfrfpcdgpgrggtcqvsgwdhvflglf
    wmyncisvvifhfswkmqsdvwgtvapdgtvshitggnfaqsaitingwlrdflwaqasq
    vigsygsalsaygllflgahfiwafslmflfsgrgywqeliesivwahnklkvapaiqpr
    alsiiqgravgvahyllggiattwafflariisvg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0A (A:)
    rvvvdndpvptsfekwakpghfdrtlargpqtttwiwnlhalahdfdthtsdledisrki
    fsahfghlavvfiwlsgmyfhgakfsnyeawladptgikpsaqvvwpivgqgilngdvgg
    gfhgiqitsglfqlwrasgitnefqlyctaigglvmaglmlfagwfhyhkrapklewfqn
    vesmlnhhlagllglgslawaghqihvslpinklldagvaakdiplphefilnpslmael
    ypkvdwgffspfftfnwaaysdfltfngglnpvtgglwlsdtahhhlaiavlfiiaghmy
    rtnwgighslkeileahkgpftgaghkglyevlttswhaqlainlammgslsiivaqhmy
    amppypylatdyptqlslfthhmwiggflvvggaahgaifmvrdydpamnqnnvldrvlr
    hrdaiishlnwvciflgfhsfglyvhndtmrafgrpqdmfsdtgiqlqpvfaqwvqnlht
    lapggtapnaaatasvafggdvvavggkvammpivlgtadfmvhhihaftihvtvlillk
    gvlfarssrlipdkanlgfrfpcdgpgrggtcqvsgwdhvflglfwmyncisvvifhfsw
    kmqsdvwgtvapdgtvshitggnfaqsaitingwlrdflwaqasqvigsygsalsaygll
    flgahfiwafslmflfsgrgywqeliesivwahnklkvapaiqpralsiiqgravgvahy
    llggiattwafflariisvg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1jb0B (B:)
    atkfpkfsqdlaqdpttrriwyaiamahdfeshdgmteenlyqkifashfghlaiiflwv
    sgslfhvawqgnfeqwvqdpvntrpiahaiwdpqfgkaavdaftqagasnpvdiaysgvy
    hwwytigmrtngdlyqgaifllilaslalfagwlhlqpkfrpslswfknaesrlnhhlag
    lfgvsslawaghlihvaipesrgqhvgwdnflstmphpaglapfftgnwgvyaqnpdtas
    hvfgtaqgagtailtflggfhpqteslwltdmahhhlaiavlfivaghmyrtqfgighsi
    kemmdakdffgtkvegpfnmphqgiyetynnslhfqlgwhlaclgvitslvaqhmyslpp
    yafiaqdhttmaalythhqyiagflmvgafahgaiflvrdydpaqnkgnvldrvlqhkea
    iishlswvslflgfhtlglyvhndvvvafgtpekqiliepvfaqfiqaahgkllygfdtl
    lsnpdsiastawpnygnvwlpgwldainsgtnslfltigpgdflvhhaialglhtttlil
    vkgaldargsklmpdkkdfgyafpcdgpgrggtcdisawdafylamfwmlntigwvtfyw
    hwkhlgvwegnvaqfnesstylmgwlrdylwlnssqlingynpfgtnnlsvwawmflfgh
    lvwatgfmfliswrgywqelietlvwahertplanlvrwkdkpvalsivqarlvglahfs
    vgyiltyaafliastaakfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0B (B:)
    atkfpkfsqdlaqdpttrriwyaiamahdfeshdgmteenlyqkifashfghlaiiflwv
    sgslfhvawqgnfeqwvqdpvntrpiahaiwdpqfgkaavdaftqagasnpvdiaysgvy
    hwwytigmrtngdlyqgaifllilaslalfagwlhlqpkfrpslswfknaesrlnhhlag
    lfgvsslawaghlihvaipesrgqhvgwdnflstmphpaglapfftgnwgvyaqnpdtas
    hvfgtaqgagtailtflggfhpqteslwltdmahhhlaiavlfivaghmyrtqfgighsi
    kemmdakdffgtkvegpfnmphqgiyetynnslhfqlgwhlaclgvitslvaqhmyslpp
    yafiaqdhttmaalythhqyiagflmvgafahgaiflvrdydpaqnkgnvldrvlqhkea
    iishlswvslflgfhtlglyvhndvvvafgtpekqiliepvfaqfiqaahgkllygfdtl
    lsnpdsiastawpnygnvwlpgwldainsgtnslfltigpgdflvhhaialglhtttlil
    vkgaldargsklmpdkkdfgyafpcdgpgrggtcdisawdafylamfwmlntigwvtfyw
    hwkhlgvwegnvaqfnesstylmgwlrdylwlnssqlingynpfgtnnlsvwawmflfgh
    lvwatgfmfliswrgywqelietlvwahertplanlvrwkdkpvalsivqarlvglahfs
    vgyiltyaafliastaakf
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jb0C (C:)
    ahtvkiydtcigctqcvracptdvlemvpwdgckagqiassprtedcvgckrcetacptd
    flsirvylgaettrsmglay
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jb0D (D:)
    ttltgqpplyggstggllsaadteekyaitwtspkeqvfemptagaavmregenlvyfar
    keqclalaaqqlrprkindykiyrifpdgetvlihpkdgvfpekvnkgreavnsvprsig
    qnpnpsqlkftgkkpydp
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1jb0E (E:)
    vqrgskvkilrpesywynevgtvasvdqtpgvkypvivrfdkvnytgysgsasgvntnnf
    alhevqevappkkgk
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0E (E:)
    vqrgskvkilrpesywynevgtvasvdqtpgvkypvivrfdkvnytgysgsasgvntnnf
    alhevqeva
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1jb0F (F:)
    mrrflalllvltlwlgftplasadvaglvpckdspafqkraaaavnttadpasgqkrfer
    ysqalcgedglphlvvdgrlsragdflipsvlflyiagwigwvgrayliavrnsgeanek
    eiiidvplaikcmltgfawplaalkelasgeltakdneitvspr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0F (F:)
    dvaglvpckdspafqkraaaavnttadpasgqkrferysqalcgedglphlvvdgrlsra
    gdflipsvlflyiagwigwvgrayliavrnsgeanekeiiidvplaikcmltgfawplaa
    lkelasgeltakdneitvspr
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jb0I (I:)
    mmgsyaasflpwifipvvcwlmptvvmgllflyiegea
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jb0J (J:)
    mkhfltylstapvlaaiwmtitagiliefnrfypdllfhpl
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >1jb0K (K:)
    mvlatlpdttwtpsvglvvilcnlfaialgryaiqsrgkgpglpialpalfegfglpell
    attsfghllaagvvsglqyagal
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0K (K:)
    ilcnlfaialgryiqsrgkgpglglpellattsfghllaagvvsgl
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1jb0L (L:)
    aeelvkpyngdpfvghlstpisdsglvktfignlpayrqglspilrglevgmahgyflig
    pwvklgplrdsdvanlgglisgialilvataclaayglvsfqkggsssdplktsegwsqf
    tagffvgamgsafvaffllenflvvdgimtglfn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0L (L:)
    lvkpyngdpfvghlstpisdsglvktfignlpayrqglspilrglevgmahgyfligpwv
    klgplrdsdvanlgglisgialilvataclaayglvsfqkggsssdplktsegwsqftag
    ffvgamgsafvaffllenflvvdgimtglfn
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1jb0M (M:)
    maltdtqvyvalviallpavlafrlstelyk
    

  • Chain 'X':
    Sequence, based on SEQRES records: (download)
    >1jb0X (X:)
    atksakptyafrtfwavlllainflvaayyfaaaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >1jb0X (X:)
    ptyafrtfwavlllainflvaayyfaaaa