PDB entry 1j78

View 1j78 on RCSB PDB site
Description: Crystallographic analysis of the human vitamin D binding protein
Class: transport, ligand binding protein
Keywords: plasma protein, vitamin D binding, actin binding, fatty acid binding, GC-globulin, Group-specific component, TRANSPORT, LIGAND BINDING PROTEIN
Deposited on 2001-05-16, released 2002-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-31, with a file datestamp of 2018-01-26.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vitamin D binding protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02774
      • variant (419)
    Domains in SCOPe 2.08: d1j78a1, d1j78a2, d1j78a3
  • Chain 'B':
    Compound: vitamin D binding protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02774
      • variant (419)
    Domains in SCOPe 2.08: d1j78b1, d1j78b2, d1j78b3
  • Heterogens: OLA, VDY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1j78A (A:)
lergrdyeknkvckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteacca
egadpdcydtrtsalsakscesnspfpvhpgtaecctkeglerklcmaalkhqpqefpty
veptndeiceafrkdpkeyanqfmweystnygqaplsllvsytksylsmvgscctsaspt
vcflkerlqlkhlsllttlsnrvcsqyaaygekksrlsnliklaqkvptadledvlplae
ditnilskccesasedcmakelpehtvklcdnlstknskfedccqektamdvfvctyfmp
aaqlpelpdvelptnkdvcdpgntkvmdkytfelsrrthlpevflskvleptlkslgecc
dvedsttcfnakgpllkkelssfidkgqelcadysentfteykkklaerlkaklpdatpt
elaklvnkrsdfasnccsinspplycdseidaelknil

    Sequence, based on observed residues (ATOM records): (download) 
    >1j78A (A:)
ckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteaccydtrtsalsaksc
esnspfpvhpgtaecctkrklcmaalkhqpqefptyveptndeiceafrkdpkeyanqfm
weystnygqaplsllvsytksylsmvgscctsasptvcflkerlqlkhlsllttlsnrvc
sqyaaygekksrlsnliklaqkvptadledvlplaeditnilskccesasedcmakelpe
htvklcdnlstknskfedccqektamdvfvctyfmpaaqlpelpdvelptnkdvcdpgnt
kvmdkytfelsrrthlpevflskvleptlkslgeccdvedsttcfnakgpllkkelssfi
dkgqelcadysentfteykkklaerlkaklpdatptelaklvnkrsdfasnccsinsppl
ycdseidaelkni

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1j78B (B:)
lergrdyeknkvckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteacca
egadpdcydtrtsalsakscesnspfpvhpgtaecctkeglerklcmaalkhqpqefpty
veptndeiceafrkdpkeyanqfmweystnygqaplsllvsytksylsmvgscctsaspt
vcflkerlqlkhlsllttlsnrvcsqyaaygekksrlsnliklaqkvptadledvlplae
ditnilskccesasedcmakelpehtvklcdnlstknskfedccqektamdvfvctyfmp
aaqlpelpdvelptnkdvcdpgntkvmdkytfelsrrthlpevflskvleptlkslgecc
dvedsttcfnakgpllkkelssfidkgqelcadysentfteykkklaerlkaklpdatpt
elaklvnkrsdfasnccsinspplycdseidaelknil

    Sequence, based on observed residues (ATOM records): (download) 
    >1j78B (B:)
rgrdyeknkvckefshlgkedftslslvlysrkfpsgtfeqvsqlvkevvslteaccaeg
adpdcydtrtsalsakscesnspfpvhpgtaecctlcmaalkhqpqefptyveptndeic
eafrkdpkeyanqfmweystnygqaplsllvsytksylsmvgscctsasptvcflkerlq
lkhlsllttlsnrvcsqyaaygekksrlsnliklaqkvptadledvlplaeditnilskc
cesasedcmakelpehtvklcdnlstknskfedccqektamdvfvctyfmpaaqlpelpd
velptnkdvcdpgntkvmdkytfelsrrthlpevflskvleptlkslgeccdvedsttcf
nakgpllkkelssfidkgqelcadysentfteykkklaerlkaklpdatptelaklvnkr
sdfasnccsinspplycdseidaelkn