PDB entry 1j3l
View 1j3l on RCSB PDB site
Description: Structure of the RNA-processing inhibitor RraA from Thermus thermophilis
Class: transferase
Keywords: Vitamine K2, Structural Genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, transferase
Deposited on
2003-02-04, released
2004-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.206
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3la_ - Chain 'B':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3lb_ - Chain 'C':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3lc_ - Chain 'D':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3ld_ - Chain 'E':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3le_ - Chain 'F':
Compound: Demethylmenaquinone Methyltransferase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1j3lf_ - Heterogens: MG, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1j3lA (A:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1j3lB (B:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1j3lC (C:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
Sequence, based on observed residues (ATOM records): (download)
>1j3lC (C:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvr
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1j3lD (D:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1j3lE (E:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1j3lF (F:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg
Sequence, based on observed residues (ATOM records): (download)
>1j3lF (F:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpepp