PDB entry 1j3l

View 1j3l on RCSB PDB site
Description: Structure of the RNA-processing inhibitor RraA from Thermus thermophilis
Class: transferase
Keywords: Vitamine K2, Structural Genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, transferase
Deposited on 2003-02-04, released 2004-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.206
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3la_
  • Chain 'B':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3lb_
  • Chain 'C':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3lc_
  • Chain 'D':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3ld_
  • Chain 'E':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3le_
  • Chain 'F':
    Compound: Demethylmenaquinone Methyltransferase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1j3lf_
  • Heterogens: MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1j3lA (A:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1j3lB (B:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1j3lC (C:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1j3lC (C:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1j3lD (D:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1j3lE (E:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1j3lF (F:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpeppsgvrsgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1j3lF (F:)
mearttdlsdlypegealpmvfksfggrarfagrvrtlrvfednalvrkvleeegagqvl
fvdgggslrtallggnlarrawekgwagvvvhgavrdteelrevpigllalaatpkksak
egkgevdvplkvlgvevlpgsflladedgllllpepp