PDB entry 1iyw

View 1iyw on RCSB PDB site
Description: Preliminary Structure of Thermus thermophilus Ligand-Free Valyl-tRNA Synthetase
Class: ligase
Keywords: Rossmann Fold, Coiled Coil, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics
Deposited on 2002-09-10, released 2003-06-17
The last revision prior to the SCOP 1.75 freeze date was dated 2003-06-17, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 4 Å
R-factor: 0.316
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: valyl-tRNA synthetase
    Species: Thermus thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1iywa1, d1iywa2, d1iywa3, d1iywa4
  • Chain 'B':
    Compound: valyl-tRNA synthetase
    Species: Thermus thermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1iywb1, d1iywb2, d1iywb3, d1iywb4

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1iywA (A:)
mdlpkaydpksvepkwaekwaknpfvanpksgkppfvifmpppnvtgslhmghaldnslq
dalirykrmrgfeavwlpgtdhagiatqvvverlllkegktrhdlgrekflervwqwkee
sggtilkqlkrlgasadwsreaftmdekrsravryafsryyheglayraprlvnwcprce
ttlsdleveteptpgklytlryevegggfieiatvrpetvfadqaiavhpederyrhllg
kraripltevwipiladpavekdfgtgalkvtpahdpldyeigerhglkpvsvinlegrm
egervpealrgldrfearrkavelfreaghlvkeedytialatcsrcgtpieyaifpqww
lrmrplaeevlkglrrgdiafvperwkkvnmdwlenvkdwnisrqlwwghqipawycedc
qavnvprperyledptsceacgsprlkrdedvfdtwfssalwplstlgwpeetedlkafy
pgdvlvtgydilflwvsrmevsgyhfmgerpfktvllhglvldekgqkmskskgnvidpl
emverygadalrfaliylatggqdirldlrwlemarnfanklynaarfvllsregfqake
dtptladrfmrsrlsrgveeitalyealdlaqaarevyelvwsefcdwyleaakpalkag
nahtlrtleevlavllkllhpmmpfltselyqaltgkeelaleawpepggrdeeaerafe
alkqavtavralkaeaglppaqevrvylegetapveenlevfrflsradllperpakalv
kamprvtarmpleglldveewrrrqekrlkellalaersqrklaspgfrekapkevveae
earlkenleqaerirealsqig

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1iywB (B:)
mdlpkaydpksvepkwaekwaknpfvanpksgkppfvifmpppnvtgslhmghaldnslq
dalirykrmrgfeavwlpgtdhagiatqvvverlllkegktrhdlgrekflervwqwkee
sggtilkqlkrlgasadwsreaftmdekrsravryafsryyheglayraprlvnwcprce
ttlsdleveteptpgklytlryevegggfieiatvrpetvfadqaiavhpederyrhllg
kraripltevwipiladpavekdfgtgalkvtpahdpldyeigerhglkpvsvinlegrm
egervpealrgldrfearrkavelfreaghlvkeedytialatcsrcgtpieyaifpqww
lrmrplaeevlkglrrgdiafvperwkkvnmdwlenvkdwnisrqlwwghqipawycedc
qavnvprperyledptsceacgsprlkrdedvfdtwfssalwplstlgwpeetedlkafy
pgdvlvtgydilflwvsrmevsgyhfmgerpfktvllhglvldekgqkmskskgnvidpl
emverygadalrfaliylatggqdirldlrwlemarnfanklynaarfvllsregfqake
dtptladrfmrsrlsrgveeitalyealdlaqaarevyelvwsefcdwyleaakpalkag
nahtlrtleevlavllkllhpmmpfltselyqaltgkeelaleawpepggrdeeaerafe
alkqavtavralkaeaglppaqevrvylegetapveenlevfrflsradllperpakalv
kamprvtarmpleglldveewrrrqekrlkellalaersqrklaspgfrekapkevveae
earlkenleqaerirealsqig