PDB entry 1ixy
View 1ixy on RCSB PDB site
Description: Ternary complex of T4 phage BGT with UDP and a 13 mer DNA duplex
Class: transferase/DNA
Keywords: protein-dna complex, base-flipping, abasic site, TRANSFERASE/DNA COMPLEX
Deposited on
2002-07-09, released
2002-12-04
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.209
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA beta-glucosyltransferase
Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
Gene: BGT
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1ixya_ - Chain 'B':
Compound: DNA beta-glucosyltransferase
Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
Gene: BGT
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1ixyb_ - Chain 'C':
Compound: 5'-d(*gp*ap*tp*ap*cp*tp*3drp*ap*gp*ap*tp*ap*g)-3'
- Chain 'D':
Compound: 5'-d(*gp*ap*tp*ap*cp*tp*3drp*ap*gp*ap*tp*ap*g)-3'
- Chain 'E':
Compound: 5'-d(*cp*tp*ap*tp*cp*tp*gp*ap*gp*tp*ap*tp*c)-3'
- Chain 'F':
Compound: 5'-d(*cp*tp*ap*tp*cp*tp*gp*ap*gp*tp*ap*tp*c)-3'
- Heterogens: MG, UDP, MPD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ixyA (A:)
mkiaiinmgnnvinfktvpssetiylfkvisemglnvdiislkngvytksfdevdvndyd
rlivvnssinffggkpnlailsaqkfmakykskiyylftdirlpfsqswpnvknrpwayl
yteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkk
tldviyggsfrsgqreskmveflfdtglnieffgnarekqfknpkypwtkapvftgkipm
nmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyv
nnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ixyB (B:)
mkiaiinmgnnvinfktvpssetiylfkvisemglnvdiislkngvytksfdevdvndyd
rlivvnssinffggkpnlailsaqkfmakykskiyylftdirlpfsqswpnvknrpwayl
yteeellikspikvisqginldiakaahkkvdnviefeyfpieqykihmndfqlskptkk
tldviyggsfrsgqreskmveflfdtglnieffgnarekqfknpkypwtkapvftgkipm
nmvseknsqaiaaliigdknyndnfitlrvwetmasdavmlideefdtkhriindarfyv
nnraelidrvnelkhsdvlrkemlsiqhdilnktrakkaewqdafkkaidl
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.