PDB entry 1iv3
View 1iv3 on RCSB PDB site
Description: Structure of 2C-Methyl-D-erythritol-2,4-cyclodiphosphate Synthase (bound form MG atoms)
Class: lyase
Keywords: isoprenoid, non-mevalonate, synthase, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, LYASE
Deposited on
2002-03-11, released
2002-09-11
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.52 Å
R-factor: 0.203
AEROSPACI score: 0.58
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3a_ - Chain 'B':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3b_ - Chain 'C':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3c_ - Chain 'D':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3d_ - Chain 'E':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3e_ - Chain 'F':
Compound: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8RQP5
- engineered (40)
- engineered (80)
- engineered (119)
Domains in SCOPe 2.03: d1iv3f_ - Heterogens: MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1iv3A (A:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3A (A:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1iv3B (B:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3B (B:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1iv3C (C:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3C (C:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1iv3D (D:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3D (D:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1iv3E (E:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3E (E:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1iv3F (F:)
mrigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigll
fpdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlm
rlpqdrigltfktseglapshvqaravvlldg
Sequence, based on observed residues (ATOM records): (download)
>1iv3F (F:)
rigygedshrleegrplylcgllipspvgalahsdgdaamhaltdallsayglgdigllf
pdtdprwrgersevflreamrlveargakllqaslvltldrpklgphrkalvdslsrlmr
lpqdrigltfktseglapshvqaravvlld