PDB entry 1il5
View 1il5 on RCSB PDB site
Description: structure of ricin a chain bound with inhibitor 2,5-diamino-4,6-dihydroxypyrimidine (ddp)
Class: hydrolase
Keywords: structure-based design, toxin-inhibitor complex, glycosidase, hydrolase, ribosome-inhibiting protein
Deposited on
2001-05-07, released
2002-01-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.225
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ricin a chain
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1il5a_ - Chain 'B':
Compound: ricin a chain
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1il5b_ - Heterogens: DDP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1il5A (A:)
ifpkqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilv
elsnhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafg
gnydrleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaar
fqyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskf
svydvsilipiialmvyrcapppssqf
Sequence, based on observed residues (ATOM records): (download)
>1il5A (A:)
ifpkqypiinfttagatvqsytnfiravrgrlttgadvheipvlpnrvglpinqrfilve
lsnhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafgg
nydrleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarf
qyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfs
vydvsilipiialmvyrcapppqf
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1il5B (B:)
ifpkqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilv
elsnhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafg
gnydrleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaar
fqyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskf
svydvsilipiialmvyrcapppssqf