PDB entry 1ied

View 1ied on RCSB PDB site
Description: crystal structure of the catalytic site mutant (h157e) of the human cytomegalovirus protease
Class: hydrolase
Keywords: coat protein, hydrolase, serine protease, catalytic triad, viral protease
Deposited on 2001-04-09, released 2001-06-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.226
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein p40: assemblin protease
    Species: Human herpesvirus 5 [TaxId:10360]
    Gene: UL80
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16753
      • engineered (156)
    Domains in SCOPe 2.08: d1ieda_
  • Chain 'B':
    Compound: capsid protein p40: assemblin protease
    Species: Human herpesvirus 5 [TaxId:10360]
    Gene: UL80
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16753 (Start-255)
      • engineered (156)
    Domains in SCOPe 2.08: d1iedb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1iedA (A:)
mtmdeqqsqavapvyvggflarydqspdeaelllprdvvehwlhaqgqgqpslsvalpln
inhddtavvghvaamqsvrdglfclgcvtsprfleivrrasekselvsrgpvsplqpdkv
veflsgsyaglslssrrcddveqatslsgsettpfkevalcsvgrrrgtlavygrdpewv
tqrfpdltaadrdglraqwqrcgstavdasgdpfrsdsygllgnsvdalyirerlpklry
dkqlvgvteresyvka

    Sequence, based on observed residues (ATOM records): (download) 
    >1iedA (A:)
qavapvyvggflarydqspdeaelllprdvvehwlhavalplninhddtavvghvaamqs
vrdglfclgcvtsprfleivrrasekselvsrgpvsplqpdkvveflsgsyaglslssrr
tpfkevalcsvgrrrgtlavygrdpewvtqrfpdltaadrdglraqwqgdpfrsdsygll
gnsvdalyirerlpklrydkqlvgvteresyvka

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1iedB (B:)
mtmdeqqsqavapvyvggflarydqspdeaelllprdvvehwlhaqgqgqpslsvalpln
inhddtavvghvaamqsvrdglfclgcvtsprfleivrrasekselvsrgpvsplqpdkv
veflsgsyaglslssrrcddveqatslsgsettpfkevalcsvgrrrgtlavygrdpewv
tqrfpdltaadrdglraqwqrcgstavdasgdpfrsdsygllgnsvdalyirerlpklry
dkqlvgvteresyvka

    Sequence, based on observed residues (ATOM records): (download) 
    >1iedB (B:)
deqqsqavapvyvggflarydqspdeaelllprdvvehwlhavalplninhddtavvghv
aamqsvrdglfclgcvtsprfleivrrasekselvsrgpvsplqpdkvveflsgsyagls
lsstpfkevalcsvgrrrgtlavygrdpewvtqrfpdltaadrdglraqwqrstavdgdp
frsdsygllgnsvdalyirerlpklrydkqlvgvteresyvka