PDB entry 1iao

View 1iao on RCSB PDB site
Description: class II MHC I-ad in complex with ovalbumin peptide 323-339
Class: MHC II
Keywords: MHC II, class II MHC, I-a, ovalbumin peptide
Deposited on 1998-03-13, released 1998-11-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.255
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class II I-ad
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1iaoa1, d1iaoa2
  • Chain 'B':
    Compound: MHC class II I-ad
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04228 (Start-213)
      • conflict (93)
    Domains in SCOPe 2.06: d1iaob1, d1iaob2, d1iaob3
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1iaoA (A:)
eddieadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfep
qgglqniaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppv
initwlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwgleepvlk
hwepeissadlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1iaoA (A:)
eadhvgfygttvyqspgdigqythefdgdelfyvdldkkktvwrlpefgqlilfepqggl
qniaaekhnlgiltkrsnftpatneapqatvfpkspvllgqpntlicfvdnifppvinit
wlrnsksvtdgvyetsflvnrdhsfhklsyltfipsdddiydckvehwgleepvlkhw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1iaoB (B:)
rgisqavhaahaeineagrgsgsgsgnserhfvvqfkgecyytngtqrirlvtryiynre
eyvrydsdvgeyravtelgrpdaeywnsqpeildrtraevdtacrhnyegpetstslrrl
eqpnvaislsrtealnhhntlvcsvtdfypakikvrwfrngqeetvgvsstqlirngdwt
fqvlvmlemtphqgevytchvehpslkspitvewssadlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >1iaoB (B:)
rgisqavhaahaeihfvvqfkgecyytngtqrirlvtryiynreeyvrydsdvgeyravt
elgrpdaeywnsqpeildrtraevdtacrhnyegpetstslrrleqpnvaislsrtealn
hhntlvcsvtdfypakikvrwfrngqeetvgvsstqlirngdwtfqvlvmlemtphqgev
ytchvehpslkspitvewss