PDB entry 1hl6
View 1hl6 on RCSB PDB site
Description: a novel mode of rbd-protein recognition in the y14-mago complex
Class: signal protein
Keywords: signal protein, rdb, exon-exon junction, oskar, rnp, nmd
Deposited on
2003-03-13, released
2003-05-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.224
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: cg8781 protein
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1hl6a_ - Chain 'B':
Compound: mago nashi protein
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1hl6b_ - Chain 'C':
Compound: cg8781 protein
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1hl6c_ - Chain 'D':
Compound: mago nashi protein
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
- Uniprot P49028 (Start-146)
- PDB 1HL6 (147-148)
Domains in SCOPe 2.08: d1hl6d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1hl6A (A:)
madvldidnaeefevdedgdqgivrlkekakhrkgrgfgsdsntreaihsyervrneddd
elepgpqrsvegwilfvtsiheeaqedeiqekfcdygeiknihlnldrrtgfskgyalve
yethkqalaakealngaeimgqtiqvdwcfvkgpkrvkksekrrr
Sequence, based on observed residues (ATOM records): (download)
>1hl6A (A:)
aeefevdedgdqgivrlkekakhrkgrgfgpgpqrsvegwilfvtsiheeaqedeiqekf
cdygeiknihlnldrrtgfskgyalveyethkqalaakealngaeimgqtiqvdwcfvk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1hl6B (B:)
mstedfylryyvghkgkfgheflefefrpdgklryannsnykndtmirkeafvhqsvmee
lkriiidseimqeddlpwpppdrvgrqeleivigdehisfttsktgslvdvnrskdpegl
rcfyylvqdlkclvfsliglhfkikpipr
Sequence, based on observed residues (ATOM records): (download)
>1hl6B (B:)
edfylryyvghkgkfgheflefefrpdgklryannsntmirkeafvhqsvmeelkriiid
seimqeddlpwpppdrvgrqeleivigdehisfttsktlvdvnrskdpeglrcfyylvqd
lkclvfsliglhfkikp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1hl6C (C:)
madvldidnaeefevdedgdqgivrlkekakhrkgrgfgsdsntreaihsyervrneddd
elepgpqrsvegwilfvtsiheeaqedeiqekfcdygeiknihlnldrrtgfskgyalve
yethkqalaakealngaeimgqtiqvdwcfvkgpkrvkksekrrr
Sequence, based on observed residues (ATOM records): (download)
>1hl6C (C:)
efevdedgdqgivrlkekakhrkgrgfpgpqrsvegwilfvtsiheeaqedeiqekfcdy
geiknihlnlfskgyalveyethkqalaakealngaeimgqtiqvdwcfvk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1hl6D (D:)
mstedfylryyvghkgkfgheflefefrpdgklryannsnykndtmirkeafvhqsvmee
lkriiidseimqeddlpwpppdrvgrqeleivigdehisfttsktgslvdvnrskdpegl
rcfyylvqdlkclvfsliglhfkikpipr
Sequence, based on observed residues (ATOM records): (download)
>1hl6D (D:)
dfylryyvghkfgheflefefrpdgklryannsnykndtmirkeafvhqsvmeelkriii
dseimqeddlpwpppdrvgrqeleivigdehisfttsktgslvdvnrskdpeglrcfyyl
vqdlkclvfsliglhfkikpipr