PDB entry 1hhk

View 1hhk on RCSB PDB site
Description: the antigenic identity of peptide(slash)MHC complexes: a comparison of the conformation of five peptides presented by hla-a2
Class: histocompatibility antigen
Keywords: histocompatibility antigen
Deposited on 1993-06-30, released 1993-10-31
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.262
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: class I histocompatibility antigen (hla-a*0201) (alpha chain)
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-2-MICROGLOBULIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1hhka1, d1hhka2
  • Chain 'B':
    Compound: beta 2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-2-MICROGLOBULIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1hhkb_
  • Chain 'C':
    Compound: nonameric peptide from htlv-1 tax protein (residues 11-19)
    Species: Human T-lymphotropic virus 1 [TaxId:11908]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: class I histocompatibility antigen (hla-a*0201) (alpha chain)
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-2-MICROGLOBULIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1hhkd1, d1hhkd2
  • Chain 'E':
    Compound: beta 2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-2-MICROGLOBULIN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1hhke_
  • Chain 'F':
    Compound: nonameric peptide from htlv-1 tax protein (residues 11-19)
    Species: Human T-lymphotropic virus 1 [TaxId:11908]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hhkA (A:)
    gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
    dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
    kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
    rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
    fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hhkB (B:)
    miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
    wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hhkD (D:)
    gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
    dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
    kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
    rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
    fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hhkE (E:)
    miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
    wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
    

  • Chain 'F':
    No sequence available.