PDB entry 1hhk

View 1hhk on RCSB PDB site
Description: the antigenic identity of peptide(slash)MHC complexes: a comparison of the conformation of five peptides presented by hla-a2
Class: histocompatibility antigen
Keywords: histocompatibility antigen
Deposited on 1993-06-30, released 1993-10-31
The last revision prior to the SCOP 1.73 freeze date was dated 1993-10-31, with a file datestamp of 2007-06-04.
Experiment type: -
Resolution: 2.5 Å
R-factor: 0.262
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: class I histocompatibility antigen (hla-a*0201) (alpha chain)
  Species: HOMO SAPIENS
  Gene: BETA-2-MICROGLOBULIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P01892 (0-274)
  Domains in SCOP 1.73: d1hhka1, d1hhka2
• Chain 'B':
  Compound: beta 2-microglobulin
  Species: HOMO SAPIENS
  Gene: BETA-2-MICROGLOBULIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (1-99)
  Domains in SCOP 1.73: d1hhkb_
• Chain 'C':
  Compound: nonameric peptide from htlv-1 tax protein (residues 11-19)
  Species: Human T-lymphotropic virus 1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P14079 (0-8)
• Chain 'D':
  Compound: class I histocompatibility antigen (hla-a*0201) (alpha chain)
  Species: HOMO SAPIENS
  Gene: BETA-2-MICROGLOBULIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P01892 (0-274)
  Domains in SCOP 1.73: d1hhkd1, d1hhkd2
• Chain 'E':
  Compound: beta 2-microglobulin
  Species: HOMO SAPIENS
  Gene: BETA-2-MICROGLOBULIN
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (1-99)
  Domains in SCOP 1.73: d1hhke_
• Chain 'F':
  Compound: nonameric peptide from htlv-1 tax protein (residues 11-19)
  Species: Human T-lymphotropic virus 1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P14079 (0-8)

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1hhkA (A:)
  gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
  dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
  kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
  rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
  fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1hhkB (B:)
  miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
  wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1hhkD (D:)
  gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
  dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
  kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
  rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
  fqkwaavvvpsgqeqrytchvqheglpkpltlrwe
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1hhkE (E:)
  miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
  wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'F':
  No sequence available.