PDB entry 1hgd
View 1hgd on RCSB PDB site
Description: binding of influenza virus hemagglutinin to analogs of its cell-surface receptor, sialic acid: analysis by proton nuclear magnetic resonance spectroscopy and x-ray crystallography
Class: Viral protein
Keywords: INFLUENZA VIRUS HEMAGGLUTININ, Viral protein
Deposited on
1991-11-01, released
1994-01-31
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.224
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgda_ - Chain 'B':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgdb_ - Chain 'C':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgdc_ - Chain 'D':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgdd_ - Chain 'E':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgde_ - Chain 'F':
Compound: hemagglutinin, chain ha1
Species: Influenza A virus [TaxId:132504]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1hgdf_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdA (A:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqngrsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdB (B:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdC (C:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqngrsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdD (D:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdE (E:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqngrsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1hgdF (F:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg