PDB entry 1hdt
View 1hdt on RCSB PDB site
Description: structure of a retro-binding peptide inhibitor complexed with human alpha-thrombin
Class: complex (serine proteinase/inhibitor)
Keywords: complex (serine proteinase/inhibitor)
Deposited on
1994-07-25, released
1995-10-15
The last revision prior to the SCOP 1.73 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.204
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: alpha-thrombin
Species: HOMO SAPIENS
Domains in SCOP 1.73: d1hdt.1 - Chain 'I':
Compound: n-[n-[n-[4-(aminoiminomethyl)amino]-1-oxobutyl]-l -phenylalanyl]-l-allo-threonyl-l-phenylalanine, methyl ester (bms-183507)
- Chain 'L':
Compound: alpha-thrombin
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1hdt.1 - Chain 'P':
Compound: hirugen peptide
- Heterogens: SO3, CH3, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1hdtH (H:)
ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
itdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
thvfrlkkwiqkvidqfge
- Chain 'I':
No sequence available.
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1hdtL (L:)
sgeadcglrplfekksledkterellesyidgr
- Chain 'P':
No sequence available.