PDB entry 1hdt

View 1hdt on RCSB PDB site
Description: structure of a retro-binding peptide inhibitor complexed with human alpha-thrombin
Class: complex (serine proteinase/inhibitor)
Keywords: complex (serine proteinase/inhibitor)
Deposited on 1994-07-25, released 1995-10-15
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.204
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: alpha-thrombin
    Species: HOMO SAPIENS
    Domains in SCOP 1.73: d1hdt.1
  • Chain 'I':
    Compound: n-[n-[n-[4-(aminoiminomethyl)amino]-1-oxobutyl]-l -phenylalanyl]-l-allo-threonyl-l-phenylalanine, methyl ester (bms-183507)
  • Chain 'L':
    Compound: alpha-thrombin
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1hdt.1
  • Chain 'P':
    Compound: hirugen peptide
  • Heterogens: SO3, CH3, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdtH (H:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqfge
    

  • Chain 'I':
    No sequence available.

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdtL (L:)
    sgeadcglrplfekksledkterellesyidgr
    

  • Chain 'P':
    No sequence available.