PDB entry 1hdb

View 1hdb on RCSB PDB site
Description: analysis of the crystal structure, molecular modeling and infrared spectroscopy of the distal beta-heme pocket valine67(e11)-threonine mutation of hemoglobin
Class: oxygen transport
Keywords: human hemoglobin, deoxy-beta-v67t, oxygen transport
Deposited on 1995-04-14, released 1996-04-03
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.149
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hemoglobin (deoxy) beta-v67t
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-GLOBIN CDNA FUSED TO A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1hdba_
  • Chain 'B':
    Compound: hemoglobin (deoxy) beta-v67t
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-GLOBIN CDNA FUSED TO A
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02023 (0-145)
      • engineered (66)
    Domains in SCOPe 2.05: d1hdbb_
  • Chain 'C':
    Compound: hemoglobin (deoxy) beta-v67t
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-GLOBIN CDNA FUSED TO A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1hdbc_
  • Chain 'D':
    Compound: hemoglobin (deoxy) beta-v67t
    Species: Homo sapiens [TaxId:9606]
    Gene: BETA-GLOBIN CDNA FUSED TO A
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02023 (0-145)
      • engineered (66)
    Domains in SCOPe 2.05: d1hdbd_
  • Heterogens: SO4, HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdbA (A:)
    vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
    kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
    vhasldkflasvstvltskyr
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdbB (B:)
    vhltpeeksavtalwgkvnvdevggealgrllvvypwtqrffesfgdlstpdavmgnpkv
    kahgkktlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
    eftppvqaayqkvvagvanalahkyh
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdbC (C:)
    vlspadktnvkaawgkvgahageygaealermflsfpttktyfphfdlshgsaqvkghgk
    kvadaltnavahvddmpnalsalsdlhahklrvdpvnfkllshcllvtlaahlpaeftpa
    vhasldkflasvstvltskyr
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1hdbD (D:)
    vhltpeeksavtalwgkvnvdevggealgrllvvypwtqrffesfgdlstpdavmgnpkv
    kahgkktlgafsdglahldnlkgtfatlselhcdklhvdpenfrllgnvlvcvlahhfgk
    eftppvqaayqkvvagvanalahkyh