PDB entry 1hd8

View 1hd8 on RCSB PDB site
Description: crystal structure of a deacylation-defective mutant of penicillin-binding protein 5 at 2.3 a resolution
Class: hydrolase
Keywords: peptidoglycan synthesis, penicillin-binding protein, dd-carboxypeptidase, hydrolase
Deposited on 2000-11-11, released 2001-11-08
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.207
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 5
    Species: Escherichia coli [TaxId:562]
    Gene: DACA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04287
      • engineered mutation (104)
    • PDB 1HD8
    Domains in SCOPe 2.05: d1hd8a1, d1hd8a2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1hd8A (A:)
ddlniktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamka
gkfketdlvtigndawatgnpvfkgsslmflkpgmqvpvsqlirdinlqsgndacvamad
faagsqdafvglmnsyvnalglknthfqtvhgldadgqyssardmaligqalirdvpney
siykekeftfngirqlnrngllwdnslnvdgiktghtdkagynlvasategqmrlisavm
ggrtfkgreaeskklltwgfrffetvnplkvgkefasepvwfgdsdraslgvdkdvylti
prgrmkdlkasyvlnsselhaplqknqvvgtinfqldgktieqrplvvlqeipegnfgdp
vid

    Sequence, based on observed residues (ATOM records): (download) 
    >1hd8A (A:)
lniktmipgvpqidaesyilidynsgkvlaeqnadvrrdpasltkmmtsyvigqamkagk
fketdlvtignlkpgmqvpvsqlirdinlqsgndacvamadfaagsqdafvglmnsyvna
lglknthfqtvhgldadgqyssardmaligqalirdvpneysiykekeftfngirqlnrn
gllwdnslnvdgiktghtdkagynlvasategqmrlisavmggrtfkgreaeskklltwg
frffetvnplkvgkefasepvwfgdsdraslgvdkdvyltiprgrmkdlkasyvlnssel
haplqknqvvgtinfqldgktieqrplvvlqeipegn