PDB entry 1hao

View 1hao on RCSB PDB site
Description: complex of human alpha-thrombin with a 15mer oligonucleotide ggttggtgtggttgg (based on nmr model of DNA)
Class: hydrolase/hydrolase inhibitor/DNA
Keywords: coagulation, quadruple helix, hydrolase-hydrolase inhibitor-DNA complex
Deposited on 1995-10-03, released 1996-04-03
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.155
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: DNA 5'-d(*gp*gp*tp*tp*gp*gp*tp*gp*tp*gp*gp*tp*tp*gp*g)-3'
  • Chain 'H':
    Compound: ALPHA-THROMBIN heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1hao.1
  • Chain 'L':
    Compound: ALPHA-THROMBIN light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1hao.1
  • Heterogens: 0G6, HOH

PDB Chain Sequences:

  • Chain 'D':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >1haoH (H:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstrir
    itdnmfcagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfy
    thvfrlkkwiqkvidqfge
    

    Sequence, based on observed residues (ATOM records): (download)
    >1haoH (H:)
    ivegsdaeigmspwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendll
    vrigkhsrtryerniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvcl
    pdretaasllqagykgrvtgwgnlketwgqpsvlqvvnlpiverpvckdstriritdnmf
    cagykpdegkrgdacegdsggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrl
    kkwiqkvidqfge
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1haoL (L:)
    tfgsgeadcglrplfekksledkterellesyidgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1haoL (L:)
    adcglrplfekksledkterellesyi