PDB entry 1h8t
View 1h8t on RCSB PDB site
Description: Echovirus 11
Class: virus
Keywords: virus, echovirus coat protein, echovirus, icosahedral virus
Deposited on
2001-02-15, released
2002-07-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2012-01-11, with a file datestamp of
2012-01-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.2462
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: echovirus 11 coat protein vp1
Species: ECHOVIRUS 11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
- Uniprot P29813 (0-End)
- conflict (47)
- conflict (77)
- conflict (83)
- conflict (130-131)
- conflict (160)
- conflict (266)
- conflict (269-270)
- conflict (275)
- conflict (278)
- conflict (282)
- conflict (288)
Domains in SCOPe 2.07: d1h8ta_ - Chain 'B':
Compound: echovirus 11 coat protein vp2
Species: ECHOVIRUS 11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
- Uniprot P29813 (Start-261)
- conflict (42)
- conflict (44)
- conflict (72)
- conflict (107)
- conflict (135)
- conflict (156)
- conflict (158)
- conflict (167)
- conflict (184)
- conflict (229)
- conflict (234)
- conflict (259)
Domains in SCOPe 2.07: d1h8t.1 - Chain 'C':
Compound: echovirus 11 coat protein vp3
Species: ECHOVIRUS 11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
- Uniprot P29813 (0-237)
- conflict (4)
- conflict (58)
- conflict (60)
- conflict (62)
- conflict (65-66)
- conflict (79)
- conflict (92)
- conflict (106)
- conflict (143)
- conflict (167)
- conflict (231)
- conflict (233)
Domains in SCOPe 2.07: d1h8tc_ - Chain 'D':
Compound: echovirus 11 coat protein vp4
Species: ECHOVIRUS 11 [TaxId:12078]
Database cross-references and differences (RAF-indexed):
- Uniprot P29813 (0-67)
- conflict (43)
- conflict (45)
Domains in SCOPe 2.07: d1h8t.1 - Heterogens: DOA, MYR, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1h8tA (A:)
gdvveavenavarvadtigsgpsnsqavpaltavetghtsqvtpsdtvqtrhvknyhsrs
essienflsrsacvymgeyhttnsdqtklfaswtisarrmvqmrrkleiftyvrfdvevt
fvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnappr
msipfisignaysnfydgwshfsqngvygyntlnhmgqiyvrhvngssplpmtstvrmyf
kpkhvkawvprpprlcqyknastvnfsptditdkrnsityipdtvkpdvsnh
Sequence, based on observed residues (ATOM records): (download)
>1h8tA (A:)
gdvveavenavarvadtigsgpsnsqavpaltavetghtsqvtpsdtvqtrhvknyhsrs
essienflsrsacvymgeyhttnsdqtklfaswtisarrmvqmrrkleiftyvrfdvevt
fvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnappr
msipfisignaysnfydgwshfsqngvygyntlnhmgqiyvrhvngssplpmtstvrmyf
kpkhvkawvprpprlcqyknastvnfsptditdkrnsityipdtvkpdvs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1h8tB (B:)
spsaeecgysdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvat
crfytlesvtwekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqg
cllvvcvpeaemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvg
nltifphqwinlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvp
itvtvapmcaeynglrlstalq
Sequence, based on observed residues (ATOM records): (download)
>1h8tB (B:)
sdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvatcrfytlesv
twekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqgcllvvcvpe
aemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvgnltifphqw
inlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvpitvtvapmc
aeynglrlstalq
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1h8tC (C:)
glpvintpgsnqfltsddfqspsampqfdvtpelnipgevqnlmeiaevdsvvpvnnvag
nletmdiyripvqsgnhqssqvfgfqvqpgldgvfkhtllgeilnyyahwsgsikltfvf
cgsamatgkfllayappganapksrkdamlgthiiwdvglqsscvlcipwisqthyrlvq
qdeytsagnvtcwyqtgivvpagtptscsimcfvsacndfsvrllkdtpfiqqaallq
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1h8tD (D:)
gaqvstqktgahetglrasgnsiihytninyykdaasnsanrqdftqdpgkftepvkdim
vkslpaln
Sequence, based on observed residues (ATOM records): (download)
>1h8tD (D:)
gaqvstqktgahetsiihytninyykdaasnsanrqdftqdpgkftepvkdimvkslpal
n