PDB entry 1h8t

View 1h8t on RCSB PDB site
Description: Echovirus 11
Class: virus
Keywords: virus, echovirus coat protein, echovirus, icosahedral virus
Deposited on 2001-02-15, released 2002-07-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-01-11, with a file datestamp of 2012-01-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.2462
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: echovirus 11 coat protein vp1
    Species: ECHOVIRUS 11 [TaxId:12078]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29813 (0-End)
      • conflict (47)
      • conflict (77)
      • conflict (83)
      • conflict (130-131)
      • conflict (160)
      • conflict (266)
      • conflict (269-270)
      • conflict (275)
      • conflict (278)
      • conflict (282)
      • conflict (288)
    Domains in SCOPe 2.07: d1h8ta_
  • Chain 'B':
    Compound: echovirus 11 coat protein vp2
    Species: ECHOVIRUS 11 [TaxId:12078]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29813 (Start-261)
      • conflict (42)
      • conflict (44)
      • conflict (72)
      • conflict (107)
      • conflict (135)
      • conflict (156)
      • conflict (158)
      • conflict (167)
      • conflict (184)
      • conflict (229)
      • conflict (234)
      • conflict (259)
    Domains in SCOPe 2.07: d1h8t.1
  • Chain 'C':
    Compound: echovirus 11 coat protein vp3
    Species: ECHOVIRUS 11 [TaxId:12078]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29813 (0-237)
      • conflict (4)
      • conflict (58)
      • conflict (60)
      • conflict (62)
      • conflict (65-66)
      • conflict (79)
      • conflict (92)
      • conflict (106)
      • conflict (143)
      • conflict (167)
      • conflict (231)
      • conflict (233)
    Domains in SCOPe 2.07: d1h8tc_
  • Chain 'D':
    Compound: echovirus 11 coat protein vp4
    Species: ECHOVIRUS 11 [TaxId:12078]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29813 (0-67)
      • conflict (43)
      • conflict (45)
    Domains in SCOPe 2.07: d1h8t.1
  • Heterogens: DOA, MYR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1h8tA (A:)
    gdvveavenavarvadtigsgpsnsqavpaltavetghtsqvtpsdtvqtrhvknyhsrs
    essienflsrsacvymgeyhttnsdqtklfaswtisarrmvqmrrkleiftyvrfdvevt
    fvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnappr
    msipfisignaysnfydgwshfsqngvygyntlnhmgqiyvrhvngssplpmtstvrmyf
    kpkhvkawvprpprlcqyknastvnfsptditdkrnsityipdtvkpdvsnh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h8tA (A:)
    gdvveavenavarvadtigsgpsnsqavpaltavetghtsqvtpsdtvqtrhvknyhsrs
    essienflsrsacvymgeyhttnsdqtklfaswtisarrmvqmrrkleiftyvrfdvevt
    fvitskqdqgtqlgqdmpplthqimyippggpipksvtdytwqtstnpsifwtegnappr
    msipfisignaysnfydgwshfsqngvygyntlnhmgqiyvrhvngssplpmtstvrmyf
    kpkhvkawvprpprlcqyknastvnfsptditdkrnsityipdtvkpdvs
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1h8tB (B:)
    spsaeecgysdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvat
    crfytlesvtwekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqg
    cllvvcvpeaemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvg
    nltifphqwinlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvp
    itvtvapmcaeynglrlstalq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h8tB (B:)
    sdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvatcrfytlesv
    twekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqgcllvvcvpe
    aemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvgnltifphqw
    inlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvpitvtvapmc
    aeynglrlstalq
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1h8tC (C:)
    glpvintpgsnqfltsddfqspsampqfdvtpelnipgevqnlmeiaevdsvvpvnnvag
    nletmdiyripvqsgnhqssqvfgfqvqpgldgvfkhtllgeilnyyahwsgsikltfvf
    cgsamatgkfllayappganapksrkdamlgthiiwdvglqsscvlcipwisqthyrlvq
    qdeytsagnvtcwyqtgivvpagtptscsimcfvsacndfsvrllkdtpfiqqaallq
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1h8tD (D:)
    gaqvstqktgahetglrasgnsiihytninyykdaasnsanrqdftqdpgkftepvkdim
    vkslpaln
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h8tD (D:)
    gaqvstqktgahetsiihytninyykdaasnsanrqdftqdpgkftepvkdimvkslpal
    n