PDB entry 1h5t

View 1h5t on RCSB PDB site
Description: Thymidylyltransferase complexed with Thymidylyldiphosphate-glucose
Class: transferase
Keywords: transferase, pyrophosphatase, nucleotide sugar methabolism
Deposited on 2001-05-25, released 2001-11-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-12-05, with a file datestamp of 2018-11-30.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glucose-1-phosphate thymidylyltransferase 1
    Species: Escherichia coli [TaxId:562]
    Gene: rfbA, rmlA, rmlA1, b2039, JW2024
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1h5ta_
  • Chain 'B':
    Compound: Glucose-1-phosphate thymidylyltransferase 1
    Species: Escherichia coli [TaxId:562]
    Gene: rfbA, rmlA, rmlA1, b2039, JW2024
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37744
      • conflict (216)
      • conflict (287)
    Domains in SCOPe 2.08: d1h5tb_
  • Chain 'C':
    Compound: Glucose-1-phosphate thymidylyltransferase 1
    Species: Escherichia coli [TaxId:562]
    Gene: rfbA, rmlA, rmlA1, b2039, JW2024
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1h5tc_
  • Chain 'D':
    Compound: Glucose-1-phosphate thymidylyltransferase 1
    Species: Escherichia coli [TaxId:562]
    Gene: rfbA, rmlA, rmlA1, b2039, JW2024
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1h5td_
  • Heterogens: TYD, DAU, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1h5tA (A:)
    mkmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqd
    tprfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlp
    klmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfyd
    ndvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfi
    atieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkdsn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h5tA (A:)
    kmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqdt
    prfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlpk
    lmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfydn
    dvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfia
    tieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkd
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1h5tB (B:)
    mkmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqd
    tprfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlp
    klmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfyd
    ndvvqmaknlkpsargeleitdinriyleqgrlsvalmgrgyawldtgthqslieasnfi
    atieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykqtkdsn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h5tB (B:)
    kmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqdt
    prfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlpk
    lmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfydn
    dvvqmaknlkpsargeleitdinriyleqgrlsvalmgrgyawldtgthqslieasnfia
    tieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykqtkd
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1h5tC (C:)
    mkmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqd
    tprfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlp
    klmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfyd
    ndvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfi
    atieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkdsn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h5tC (C:)
    kmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqdt
    prfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlpk
    lmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfydn
    dvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfia
    tieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkd
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1h5tD (D:)
    mkmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqd
    tprfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlp
    klmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfyd
    ndvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfi
    atieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkdsn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h5tD (D:)
    kmrkgiilaggsgtrlypvtmavskqllpiydkpmiyyplstlmlagirdiliistpqdt
    prfqqllgdgsqwglnlqykvqpspdglaqafiigeefiggddcalvlgdnifyghdlpk
    lmeaavnkesgatvfayhvndperygvvefdkngtaisleekplepksnyavtglyfydn
    dvvqmaknlkpsargeleitdinriyleqgrlsvammgrgyawldtgthqslieasnfia
    tieerqglkvscpeeiafrkgfidveqvrklavpliknnygqylykmtkd