PDB entry 1h4t

View 1h4t on RCSB PDB site
Description: prolyl-tRNA synthetase from thermus thermophilus complexed with l-proline
Class: aminoacyl-tRNA synthetase
Keywords: aminoacyl-tRNA synthetase, ATP + l-proline + tRNA(pro) amp + ppi + l-prolyl-tRNA(pro), class II aminoacyl-tRNA synthetase
Deposited on 2001-05-14, released 2001-06-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.2
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: prolyl-tRNA synthetase
    Species: THERMUS THERMOPHILUS [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • PDB 1H4T (Start-476)
    Domains in SCOPe 2.08: d1h4ta1, d1h4ta2, d1h4ta3
  • Chain 'B':
    Compound: prolyl-tRNA synthetase
    Species: THERMUS THERMOPHILUS [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • PDB 1H4T (Start-476)
    Domains in SCOPe 2.08: d1h4tb1, d1h4tb2, d1h4tb3
  • Chain 'C':
    Compound: prolyl-tRNA synthetase
    Species: THERMUS THERMOPHILUS [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • PDB 1H4T (Start-476)
    Domains in SCOPe 2.08: d1h4tc1, d1h4tc2, d1h4tc3
  • Chain 'D':
    Compound: prolyl-tRNA synthetase
    Species: THERMUS THERMOPHILUS [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • PDB 1H4T (Start-476)
    Domains in SCOPe 2.08: d1h4td1, d1h4td2, d1h4td3
  • Heterogens: PRO, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1h4tA (A:)
    makekgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfke
    tghqnayfplfipmsflrkeaehvegfspelavvthaggeeleeplavrptsetvigymw
    skwirswrdlpqllnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmls
    iyarlareyaaipvieglktekekfagavytttiealmkdgkalqagtshylgenfaraf
    dikfqdrdlqvkyvhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdes
    rervleaaqglrqallaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqa
    vlasrlggketlplaalpealpgkldafheelyrralafredhtrkvdtyeafkeavqeg
    falafhcgdkacerliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h4tA (A:)
    kgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfketghq
    nayfplfipmsflfspelavvthaggeeleeplavrptsetvigymwskwirswrdlpql
    lnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmlsiyarlareyaaip
    vieglktekekfagavytttiealmkdgkalqagtshylgenfarafdikfqdrdlqvky
    vhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdesrervleaaqglrq
    allaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqavlasrlggketlp
    laalpealpgkldafheelyrralafredhtrkvdtyeafkeavqegfalafhcgdkace
    rliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1h4tB (B:)
    makekgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfke
    tghqnayfplfipmsflrkeaehvegfspelavvthaggeeleeplavrptsetvigymw
    skwirswrdlpqllnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmls
    iyarlareyaaipvieglktekekfagavytttiealmkdgkalqagtshylgenfaraf
    dikfqdrdlqvkyvhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdes
    rervleaaqglrqallaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqa
    vlasrlggketlplaalpealpgkldafheelyrralafredhtrkvdtyeafkeavqeg
    falafhcgdkacerliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h4tB (B:)
    kgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfketghq
    nayfplfipmsflfspelavvthaggeeleeplavrptsetvigymwskwirswrdlpql
    lnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmlsiyarlareyaaip
    vieglktekekfagavytttiealmkdgkalqagtshylgenfarafdikfqdrdlqvky
    vhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdesrervleaaqglrq
    allaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqavlasrlggketlp
    laalpealpgkldafheelyrralafredhtrkvdtyeafkeavqegfalafhcgdkace
    rliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1h4tC (C:)
    makekgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfke
    tghqnayfplfipmsflrkeaehvegfspelavvthaggeeleeplavrptsetvigymw
    skwirswrdlpqllnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmls
    iyarlareyaaipvieglktekekfagavytttiealmkdgkalqagtshylgenfaraf
    dikfqdrdlqvkyvhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdes
    rervleaaqglrqallaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqa
    vlasrlggketlplaalpealpgkldafheelyrralafredhtrkvdtyeafkeavqeg
    falafhcgdkacerliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h4tC (C:)
    kgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfketghq
    nayfplfipmsflfspelavvthaggeeleeplavrptsetvigymwskwirswrdlpql
    lnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmlsiyarlareyaaip
    vieglktekekfagavytttiealmkdgkalqagtshylgenfarafdikfqdrdlqvky
    vhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdesrervleaaqglrq
    allaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqavlasrlggketlp
    laalpealpgkldafheelyrralafredhtrkvdtyeafkeavqegfalafhcgdkace
    rliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1h4tD (D:)
    makekgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfke
    tghqnayfplfipmsflrkeaehvegfspelavvthaggeeleeplavrptsetvigymw
    skwirswrdlpqllnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmls
    iyarlareyaaipvieglktekekfagavytttiealmkdgkalqagtshylgenfaraf
    dikfqdrdlqvkyvhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdes
    rervleaaqglrqallaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqa
    vlasrlggketlplaalpealpgkldafheelyrralafredhtrkvdtyeafkeavqeg
    falafhcgdkacerliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay
    

    Sequence, based on observed residues (ATOM records): (download)
    >1h4tD (D:)
    kgltpqsqdfsewyleviqkaeladygpvrgtivvrpygyaiweniqqvldrmfketghq
    nayfplfipmsflfspelavvthaggeeleeplavrptsetvigymwskwirswrdlpql
    lnqwgnvvrwemrtrpflrtseflwqeghtahatreeaeeevrrmlsiyarlareyaaip
    vieglktekekfagavytttiealmkdgkalqagtshylgenfarafdikfqdrdlqvky
    vhttswglswrfigaiimthgddrglvlpprlapiqvvivpiykdesrervleaaqglrq
    allaqglrvhlddrdqhtpgykfhewelkgvpfrvelgpkdleggqavlasrlggketlp
    laalpealpgkldafheelyrralafredhtrkvdtyeafkeavqegfalafhcgdkace
    rliqeettattrcvpfeaepeegfcvrcgrpsaygkrvvfakay