PDB entry 1h21
View 1h21 on RCSB PDB site
Description: a novel iron centre in the split-soret cytochrome c from desulfovibrio desulfuricans atcc 27774
Class: cytochrome
Keywords: cytochrome, dimeric di-heme cytochrome, stacked heme arrangement, novel fold, novel iron-sulfur centre, electron transport, sulfate respiration
Deposited on
2002-07-30, released
2003-02-20
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.199
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: split-soret cytochrome c
Species: Desulfovibrio desulfuricans [TaxId:876]
Database cross-references and differences (RAF-indexed):
- Uniprot P81040 (Start-246)
- conflict see remark 9 (85)
- conflict see remark 9 (170)
Domains in SCOPe 2.06: d1h21a_ - Chain 'B':
Compound: split-soret cytochrome c
Species: Desulfovibrio desulfuricans [TaxId:876]
Database cross-references and differences (RAF-indexed):
- Uniprot P81040 (Start-246)
- conflict see remark 9 (85)
- conflict see remark 9 (170)
Domains in SCOPe 2.06: d1h21b_ - Chain 'C':
Compound: split-soret cytochrome c
Species: Desulfovibrio desulfuricans [TaxId:876]
Database cross-references and differences (RAF-indexed):
- Uniprot P81040 (Start-246)
- conflict see remark 9 (85)
- conflict see remark 9 (170)
Domains in SCOPe 2.06: d1h21c_ - Chain 'D':
Compound: split-soret cytochrome c
Species: Desulfovibrio desulfuricans [TaxId:876]
Database cross-references and differences (RAF-indexed):
- Uniprot P81040 (Start-246)
- conflict see remark 9 (85)
- conflict see remark 9 (170)
Domains in SCOPe 2.06: d1h21d_ - Heterogens: HEC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1h21A (A:)
geaqpasgrfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgeky
gapynqfpfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtk
lpifnpgdaaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaaf
kaaeiintkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatq
nkfvnhp
Sequence, based on observed residues (ATOM records): (download)
>1h21A (A:)
grfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgekygapynqf
pfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtklpifnpg
daaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaafkaaeiin
tkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatqnkfvnhp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1h21B (B:)
geaqpasgrfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgeky
gapynqfpfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtk
lpifnpgdaaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaaf
kaaeiintkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatq
nkfvnhp
Sequence, based on observed residues (ATOM records): (download)
>1h21B (B:)
grfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgekygapynqf
pfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtklpifnpg
daaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaafkaaeiin
tkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatqnkfvnhp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1h21C (C:)
geaqpasgrfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgeky
gapynqfpfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtk
lpifnpgdaaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaaf
kaaeiintkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatq
nkfvnhp
Sequence, based on observed residues (ATOM records): (download)
>1h21C (C:)
grfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgekygapynqf
pfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtklpifnpg
daaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaafkaaeiin
tkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatqnkfvnhp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1h21D (D:)
geaqpasgrfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgeky
gapynqfpfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtk
lpifnpgdaaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaaf
kaaeiintkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatq
nkfvnhp
Sequence, based on observed residues (ATOM records): (download)
>1h21D (D:)
grfdqvggafgwkphkldpkecaqvaydgywykgfgcgfgafysivglmgekygapynqf
pfamleankggisdwgticgalygaaatfslfwgrkevhpmvnelfrwyevtklpifnpg
daaqgvkgdlpmsasdsvlchisvskwcyenkieatskqrsercgrltadaafkaaeiin
tkidqgkdfkstfpmqasvsscgechmtkgndanwakgimdctpchsgtaatqnkfvnhp