PDB entry 1gzs
View 1gzs on RCSB PDB site
Description: crystal structure of the complex between the gef domain of the salmonella typhimurium sope toxin and human cdc42
Class: toxin/cell cycle
Keywords: toxin/cell cycle, complex (toxin/cell cycle protein), sope, cdc42, salmonella typhimurium, gef, toxin, GTP- binding, lipoprotein, prenylation
Deposited on
2002-06-05, released
2002-09-12
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.226
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: GTP-binding protein
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 1GZS (77-78)
- Uniprot P25763 (2-179)
Domains in SCOPe 2.05: d1gzsa_ - Chain 'B':
Compound: sope
Species: Salmonella typhimurium [TaxId:602]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1gzsb_ - Chain 'C':
Compound: GTP-binding protein
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 1GZS (77-78)
- Uniprot P25763 (2-179)
Domains in SCOPe 2.05: d1gzsc_ - Chain 'D':
Compound: sope
Species: Salmonella typhimurium [TaxId:602]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1gzsd_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1gzsA (A:)
gsmqtikcvvvgdgavgktcllisyttnkfpseyvptvfdnyavtvmiggepytlglfdt
agqedydrlrplsypqtdvflvcfsvvspssfenvkekwvpeithhcpktpfllvgtqid
lrddpstieklaknkqkpitpetaeklardlkavkyvecsaltqkglknvfdeailaale
Sequence, based on observed residues (ATOM records): (download)
>1gzsA (A:)
mqtikcvvvgdgavgktcllisyttnkfpseyvptvfdnyavtvmiggepytlglfdtag
qedydrlrplsypqtdvflvcfsvvspssfenvkekwvpeithhcpktpfllvgtqidlr
ddpstieklaknkqkpitpetaeklardlkavkyvecsaltqkglknvfdeailaale
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1gzsB (B:)
gsltnkvvkdfmlqtlndidirgsaskdpayasqtreailsavysknkdqccnlliskgi
niapflqeigeaaknaglpgttkndvftpsgaganpfitplissanskyprmfinqhqqa
sfkiyaekiimtevaplfnecamptpqqfqlileniankyiqntp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1gzsC (C:)
gsmqtikcvvvgdgavgktcllisyttnkfpseyvptvfdnyavtvmiggepytlglfdt
agqedydrlrplsypqtdvflvcfsvvspssfenvkekwvpeithhcpktpfllvgtqid
lrddpstieklaknkqkpitpetaeklardlkavkyvecsaltqkglknvfdeailaale
Sequence, based on observed residues (ATOM records): (download)
>1gzsC (C:)
mqtikcvvvgdgavgktcllisyttnkfpseyvptvfdnyavtvmiggepytlglfdtag
qedydrlrplsypqtdvflvcfsvvspssfenvkekwvpeithhcpktpfllvgtqidlr
ddpstieklaknkqkpitpetaeklardlkavkyvecsaltqkglknvfdeailaale
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1gzsD (D:)
gsltnkvvkdfmlqtlndidirgsaskdpayasqtreailsavysknkdqccnlliskgi
niapflqeigeaaknaglpgttkndvftpsgaganpfitplissanskyprmfinqhqqa
sfkiyaekiimtevaplfnecamptpqqfqlileniankyiqntp
Sequence, based on observed residues (ATOM records): (download)
>1gzsD (D:)
sltnkvvkdfmlqtlndidirgsaskdpayasqtreailsavysknkdqccnlliskgin
iapflqeigeaaknaglpgttkndvftpsgaganpfitplissanskyprmfinqhqqas
fkiyaekiimtevaplfnecamptpqqfqlileniankyiqntp