PDB entry 1gyq

View 1gyq on RCSB PDB site
Description: crystal structure of glycosomal glyceraldehyde from leishmania mexicana in complex with n6-benzyl-nad
Class: oxidoreductase
Keywords: oxidoreductase (aldehyde(d)-nad+(a))
Deposited on 1999-03-05, released 1999-03-16
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (glyceraldehyde-3-phosphate dehydrogenase)
    Species: Leishmania mexicana [TaxId:5665]
    Gene: GLYCERALDEHYDE-3-PHOSPHATEURCE 6 DEHYDROGENASE
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1gyqa1, d1gyqa2
  • Chain 'B':
    Compound: protein (glyceraldehyde-3-phosphate dehydrogenase)
    Species: Leishmania mexicana [TaxId:5665]
    Gene: GLYCERALDEHYDE-3-PHOSPHATEURCE 6 DEHYDROGENASE
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1gyqb1, d1gyqb2
  • Chain 'C':
    Compound: protein (glyceraldehyde-3-phosphate dehydrogenase)
    Species: Leishmania mexicana [TaxId:5665]
    Gene: GLYCERALDEHYDE-3-PHOSPHATEURCE 6 DEHYDROGENASE
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1gyqc1, d1gyqc2
  • Chain 'D':
    Compound: protein (glyceraldehyde-3-phosphate dehydrogenase)
    Species: Leishmania mexicana [TaxId:5665]
    Gene: GLYCERALDEHYDE-3-PHOSPHATEURCE 6 DEHYDROGENASE
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1gyqd1, d1gyqd2
  • Heterogens: NBD

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1gyqA (A:)
apikvgingfgrigrmvfqaicdqgligteidvvavvdmstnaeyfayqmkhdtvhgrpk
ytveavksspsvetadvlvvnghrikcvkaqrnpadlpwgklgvdyviestglftdklka
eghikggakkvvisapasggaktivmgvnqheyspashhvvsnascttnclapivhvltk
enfgietglmttihsytatqktvdgvslkdwrggraaavniipsttgaakavgmvipstk
gkltgmsfrvptpdvsvvdltfratrdtsiqeidkaikkaaqtymkgilgftdeelvsad
findnrssvydskatlqnnlpgekrffkvvswydnewayshrvvdlvrymaakdaass

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1gyqB (B:)
apikvgingfgrigrmvfqaicdqgligteidvvavvdmstnaeyfayqmkhdtvhgrpk
ytveavksspsvetadvlvvnghrikcvkaqrnpadlpwgklgvdyviestglftdklka
eghikggakkvvisapasggaktivmgvnqheyspashhvvsnascttnclapivhvltk
enfgietglmttihsytatqktvdgvslkdwrggraaavniipsttgaakavgmvipstk
gkltgmsfrvptpdvsvvdltfratrdtsiqeidkaikkaaqtymkgilgftdeelvsad
findnrssvydskatlqnnlpgekrffkvvswydnewayshrvvdlvrymaakdaass

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1gyqC (C:)
apikvgingfgrigrmvfqaicdqgligteidvvavvdmstnaeyfayqmkhdtvhgrpk
ytveavksspsvetadvlvvnghrikcvkaqrnpadlpwgklgvdyviestglftdklka
eghikggakkvvisapasggaktivmgvnqheyspashhvvsnascttnclapivhvltk
enfgietglmttihsytatqktvdgvslkdwrggraaavniipsttgaakavgmvipstk
gkltgmsfrvptpdvsvvdltfratrdtsiqeidkaikkaaqtymkgilgftdeelvsad
findnrssvydskatlqnnlpgekrffkvvswydnewayshrvvdlvrymaakdaass

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1gyqD (D:)
apikvgingfgrigrmvfqaicdqgligteidvvavvdmstnaeyfayqmkhdtvhgrpk
ytveavksspsvetadvlvvnghrikcvkaqrnpadlpwgklgvdyviestglftdklka
eghikggakkvvisapasggaktivmgvnqheyspashhvvsnascttnclapivhvltk
enfgietglmttihsytatqktvdgvslkdwrggraaavniipsttgaakavgmvipstk
gkltgmsfrvptpdvsvvdltfratrdtsiqeidkaikkaaqtymkgilgftdeelvsad
findnrssvydskatlqnnlpgekrffkvvswydnewayshrvvdlvrymaakdaass