PDB entry 1gth

View 1gth on RCSB PDB site
Description: dihydropyrimidine dehydrogenase (dpd) from pig, ternary complex with nadph and 5-iodouracil
Class: oxidoreductase
Keywords: electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase
Deposited on 2002-01-15, released 2002-04-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-23, with a file datestamp of 2019-01-18.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1gthA (A:)
    mapvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfd
    dikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdn
    plgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqe
    kmpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydv
    vnfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqd
    qgfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvf
    lvfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwn
    ededqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfagg
    divgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemagl
    kfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmy
    gpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeas
    gadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsi
    araakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtt
    iaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallyl
    ksieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeq
    naafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcy
    mtcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    vnpvc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1gthA (A:)
    apvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfdd
    ikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdnp
    lgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqek
    mpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydvv
    nfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqdq
    gfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvfl
    vfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwne
    dedqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfaggd
    ivgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemaglk
    finpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmyg
    pgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeasg
    adalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsia
    raakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtti
    aralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallylk
    sieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeqn
    aafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcym
    tcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1gthB (B:)
    mapvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfd
    dikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdn
    plgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqe
    kmpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydv
    vnfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqd
    qgfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvf
    lvfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwn
    ededqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfagg
    divgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemagl
    kfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmy
    gpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeas
    gadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsi
    araakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtt
    iaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallyl
    ksieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeq
    naafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcy
    mtcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    vnpvc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1gthB (B:)
    apvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfdd
    ikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdnp
    lgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqek
    mpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydvv
    nfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqdq
    gfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvfl
    vfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwne
    dedqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfaggd
    ivgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemaglk
    finpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmyg
    pgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeasg
    adalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsia
    raakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtti
    aralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallylk
    sieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeqe
    rkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcymtcndsgy
    qaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1gthC (C:)
    mapvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfd
    dikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdn
    plgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqe
    kmpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydv
    vnfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqd
    qgfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvf
    lvfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwn
    ededqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfagg
    divgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemagl
    kfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmy
    gpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeas
    gadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsi
    araakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtt
    iaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallyl
    ksieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeq
    naafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcy
    mtcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    vnpvc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1gthC (C:)
    apvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfdd
    ikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdnp
    lgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqek
    mpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydvv
    nfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqdq
    gfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvfl
    vfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwne
    dedqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfaggd
    ivgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemaglk
    finpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmyg
    pgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeasg
    adalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsia
    raakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtti
    aralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallylk
    sieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeqn
    alerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcymtcnd
    sgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1gthD (D:)
    mapvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfd
    dikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdn
    plgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqe
    kmpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydv
    vnfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqd
    qgfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvf
    lvfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwn
    ededqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfagg
    divgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemagl
    kfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmy
    gpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeas
    gadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsi
    araakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtt
    iaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallyl
    ksieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeq
    naafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcy
    mtcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla
    vnpvc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1gthD (D:)
    apvlskdvadiesilalnprtqshaalhstlakkldkkhwkrnpdkncfhceklennfdd
    ikhttlgergalreamrclkcadapcqkscpthldiksfitsisnknyygaakmifsdnp
    lgltcgmvcptsdlcvggcnlyateegsinigglqqfasevfkamnipqirnpclpsqek
    mpeaysakiallgagpasiscasflarlgysditifekqeyvgglstseipqfrlpydvv
    nfeielmkdlgvkiicgkslseneitlntlkeegykaafigiglpepktddifqgltqdq
    gfytskdflplvaksskagmcachsplpsirgavivlgagdtafdcatsalrcgarrvfl
    vfrkgfvniravpeevelakeekceflpflsprkvivkggrivavqfvrteqdetgkwne
    dedqivhlkadvvisafgsvlrdpkvkealspikfnrwdlpevdpetmqtsepwvfaggd
    ivgmanttvesvndgkqaswyihkyiqaqygasvsakpelplfytpvdlvdisvemaglk
    finpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivrgttsgpmyg
    pgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwmelsrkaeasg
    adalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltpnvtdivsia
    raakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialravtti
    aralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkallylk
    sieelqgwdgqspgteshqkgkpvpriaelmgkklpnfgpyleqrkkiiaeekmrlkeqn
    aafpplerkpfipkkpipaikdvigkalqylgtfgelsnieqvvavideemcincgkcym
    tcndsgyqaiqfdpethlptvtdtctgctlclsvcpiidcirmvsrttpyepkrglpla