PDB entry 1glf

View 1glf on RCSB PDB site
Description: crystal structures of escherichia coli glycerol kinase and the mutant a65t in an inactive tetramer: conformational changes and implications for allosteric regulation
Class: transferase
Keywords: allostery, cooperativity, glycerol kinase, transferase
Deposited on 1998-08-30, released 1998-10-16
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.62 Å
R-factor: 0.146
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'O':
    Compound: protein (glycerol kinase)
    Species: Escherichia coli [TaxId:562]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1glfo1, d1glfo2
  • Chain 'X':
    Compound: protein (glycerol kinase)
    Species: Escherichia coli [TaxId:562]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1glfx1, d1glfx2
  • Chain 'Y':
    Compound: protein (glycerol kinase)
    Species: Escherichia coli [TaxId:562]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1glfy1, d1glfy2
  • Chain 'Z':
    Compound: protein (glycerol kinase)
    Species: Escherichia coli [TaxId:562]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1glfz1, d1glfz2
  • Heterogens: PO4, ADP, GOL, HOH

PDB Chain Sequences:

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1glfO (O:)
tekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstl
vevlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgl
edyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhv
tdytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripis
giagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevny
alegavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpya
rgaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmq
fqsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgiettern
yryagwkkavkramaweehde

    Sequence, based on observed residues (ATOM records): (download) 
    >1glfO (O:)
ekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstlv
evlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgle
dyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhvt
dytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripisg
iagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevnya
legavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpyar
gaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmqf
qsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgietterny
ryagwkkavkramaweeh

  • Chain 'X':
    Sequence, based on SEQRES records: (download) 
    >1glfX (X:)
tekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstl
vevlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgl
edyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhv
tdytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripis
giagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevny
alegavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpya
rgaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmq
fqsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgiettern
yryagwkkavkramaweehde

    Sequence, based on observed residues (ATOM records): (download) 
    >1glfX (X:)
kkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstlve
vlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgled
yirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhvtd
ytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripisgi
agdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevnyal
egavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpyarg
aifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmqfq
sdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgietternyr
yagwkkavkramaweehd

  • Chain 'Y':
    Sequence, based on SEQRES records: (download) 
    >1glfY (Y:)
tekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstl
vevlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgl
edyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhv
tdytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripis
giagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevny
alegavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpya
rgaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmq
fqsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgiettern
yryagwkkavkramaweehde

    Sequence, based on observed residues (ATOM records): (download) 
    >1glfY (Y:)
ekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstlv
evlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgle
dyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhvt
dytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripisg
iagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevnya
legavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpyar
gaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmqf
qsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgietterny
ryagwkkavkramaweehd

  • Chain 'Z':
    Sequence, based on SEQRES records: (download) 
    >1glfZ (Z:)
tekkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstl
vevlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgl
edyirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhv
tdytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripis
giagdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevny
alegavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpya
rgaifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmq
fqsdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgiettern
yryagwkkavkramaweehde

    Sequence, based on observed residues (ATOM records): (download) 
    >1glfZ (Z:)
kkyivaldqgttssravvmdhdaniisvsqrefeqiypkpgwvehdpmeiwatqsstlve
vlakadissdqiaaigitnqrettivweketgkpiynaivwqcrrtaeicehlkrdgled
yirsntglvidpyfsgtkvkwildhvegsrerarrgellfgtvdtwliwkmtqgrvhvtd
ytnasrtmlfnihtldwddkmlevldipremlpevrrssevygqtniggkggtripisgi
agdqqaalfgqlcvkegmakntygtgcfmlmntgekavksengllttiacgptgevnyal
egavfmagasiqwlrdemklindaydseyfatkvqntngvyvvpaftglgapywdpyarg
aifgltrgvnanhiiratlesiayqtrdvleamqadsgirlhalrvdggavannflmqfq
sdilgtrverpevrevtalgaaylaglavgfwqnldelqekavierefrpgietternyr
yagwkkavkramaweehd