PDB entry 1gl4
View 1gl4 on RCSB PDB site
Description: nidogen-1 g2/perlecan ig3 complex
Class: basement membrane
Keywords: basement membrane, immunoglobulin-like domain, extracellular matrix, proteoglycan, heparan sulfate
Deposited on
2001-08-23, released
2001-11-28
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.217
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: nidogen-1
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1gl4a1, d1gl4a2 - Chain 'B':
Compound: basement membrane-specific heparan sulfate proteoglycan core protein
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d1gl4b_ - Heterogens: ZN, EPE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1gl4A (A:)
aplaqqtcannrhqcsvhaecrdyatgfccrcvanytgngrqcvaegspqrvngkvkgri
fvgssqvpvvfentdlhsyvvmnhgrsytaistipetvgysllplapiggiigwmfaveq
dgfkngfsitggeftrqaevtflghpgklvlkqqfsgidehghltistelegrvpqipyg
asvhiepytelyhysssvitssstreytvmepdqdgaapshthiyqwrqtitfqecahdd
arpalpstqqlsvdsvfvlynkeerilryalsnsigpvrdgspda
Sequence, based on observed residues (ATOM records): (download)
>1gl4A (A:)
tcannrhqcsvhaecrdyatgfccrcvanytgngrqcvaegspqrvngkvkgrifvgssq
vpvvfentdlhsyvvmnhgrsytaistipetvgysllplapiggiigwmfaveqdgfkng
fsitggeftrqaevtflghpgklvlkqqfsgidehghltistelegrvpqipygasvhie
pytelyhysssvitssstreytvmepdqdgaapshthiyqwrqtitfqecahddarpalp
stqqlsvdsvfvlynkeerilryalsnsigpvr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1gl4B (B:)
aplaapskpimvtveeqrsqsvrpgadvtfictakskspaytlvwtrlhngklpsramdf
ngiltirnvqpsdagtyvctgsnmfamdqgtatlhvqv
Sequence, based on observed residues (ATOM records): (download)
>1gl4B (B:)
pimvtveeqrsqsvrpgadvtfictakskspaytlvwtrlhngklpsramdfngiltirn
vqpsdagtyvctgsnmfamdqgtatlhvq