PDB entry 1gk8

View 1gk8 on RCSB PDB site
Description: Rubisco from Chlamydomonas reinhardtii
Class: lyase
Keywords: lyase, rubisco, photosynthesis
Deposited on 2001-08-09, released 2001-10-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribulose-1,5 bisphosphate carboxylase large chain
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00877 (Start-474)
      • conflict (45)
    Domains in SCOPe 2.08: d1gk8a1, d1gk8a2
  • Chain 'C':
    Compound: ribulose-1,5 bisphosphate carboxylase large chain
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00877 (Start-474)
      • conflict (45)
    Domains in SCOPe 2.08: d1gk8c1, d1gk8c2
  • Chain 'E':
    Compound: ribulose-1,5 bisphosphate carboxylase large chain
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00877 (Start-474)
      • conflict (45)
    Domains in SCOPe 2.08: d1gk8e1, d1gk8e2
  • Chain 'G':
    Compound: ribulose-1,5 bisphosphate carboxylase large chain
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00877 (Start-474)
      • conflict (45)
    Domains in SCOPe 2.08: d1gk8g1, d1gk8g2
  • Chain 'I':
    Compound: ribulose bisphosphate carboxylase small chain 1
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gk8i_
  • Chain 'K':
    Compound: ribulose bisphosphate carboxylase small chain 1
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gk8k_
  • Chain 'M':
    Compound: ribulose bisphosphate carboxylase small chain 1
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gk8m_
  • Chain 'O':
    Compound: ribulose bisphosphate carboxylase small chain 1
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1gk8o_
  • Heterogens: MG, CAP, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1gk8A (A:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8A (A:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1gk8C (C:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8C (C:)
tkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtw
ttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfg
fkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknyg
ravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagt
ceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrn
hgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftq
dwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvalea
ctqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1gk8E (E:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8E (E:)
agfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtwttvw
tdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfgfkal
ralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknygravy
eclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagtceem
mkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrnhgih
frvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftqdwcs
mpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvaleactqa
rnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1gk8G (G:)
mvpqtetkagagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaae
sstgtwttvwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsi
vgnvfgfkalralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklgl
saknygravyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghyl
natagtceemmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhav
idrqrnhgihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsr
giyftqdwcsmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaan
rvaleactqarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8G (G:)
agagfkagvkdyrltyytpdyvvrdtdilaafrmtpqpgvppeecgaavaaesstgtwtt
vwtdgltsldrykgrcydiepvpgednqyiayvaypidlfeegsvtnmftsivgnvfgfk
alralrledlrippayvktfvgpphgiqverdklnkygrgllgctikpklglsaknygra
vyeclrggldftkddenvnsqpfmrwrdrflfvaeaiykaqaetgevkghylnatagtce
emmkravcakelgvpiimhdyltggftantslaiycrdnglllhihramhavidrqrnhg
ihfrvlakalrmsggdhlhsgtvvgklegerevtlgfvdlmrddyvekdrsrgiyftqdw
csmpgvmpvasggihvwhmpalveifgddaclqfgggtlghpwgnapgaaanrvaleact
qarnegrdlareggdvirsackwspelaaacevwkeikfefdtidkl

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1gk8I (I:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrpktardfqpankrsv

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8I (I:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrp

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1gk8K (K:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrpktardfqpankrsv

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8K (K:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrp

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1gk8M (M:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrpktardfqpankrsv

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8M (M:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrp

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1gk8O (O:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrpktardfqpankrsv

    Sequence, based on observed residues (ATOM records): (download) 
    >1gk8O (O:)
mmvwtpvnnkmfetfsylppltdeqiaaqvdyivangwipclefaeadkayvsnesairf
gsvsclyydnrywtmwklpmfgcrdpmqvlreivactkafpdayvrlvafdnqkqvqimg
flvqrp