PDB entry 1gh6
View 1gh6 on RCSB PDB site
Description: retinoblastoma pocket complexed with sv40 large t antigen
Class: antitumor protein
Keywords: tumor suppressor, oncoprotein, antitumor protein
Deposited on
2000-11-15, released
2001-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-06-28, with a file datestamp of
2017-06-23.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.1
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: large t antigen
Species: Simian virus 40 [TaxId:1891767]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1gh6a1, d1gh6a2 - Chain 'B':
Compound: Retinoblastoma-associated protein
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P06400 (0-198)
- conflict (57)
- conflict (61)
- linker (199-204)
- Uniprot P06400 (205-332)
Domains in SCOPe 2.08: d1gh6b1, d1gh6b2
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1gh6A (A:)
shmreeslqlmdllglersawgniplmrkaylkkckefhpdkggdeekmkkmntlykkme
dgvkyahqpdfggfwdateiptygtdeweqwwnafneenlfcseempssddeat
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1gh6B (B:)
mntiqqlmmilnsasdqpsenlisyfnnctvnpkesilkrvkdigyifkekfakavgagc
vaigsqryklgvrlyyrvmesmlkseeerlsiqnfskllndnifhmsllacalevvmaty
srstsqnldsgtdlsfpwilnvlnlkafdfykviesfikaegnltremikhlercehrim
eslawlsdsplfdlikqsklvprgstslslfykkvyrlaylrlntlcerllsehpelehi
iwtlfqhtlqneyelmrdrhldqimmcsmygickvknidlkfkiivtaykdlphavqetf
krvlikeeeydsiivfynsvfmqrlktnilqya
Sequence, based on observed residues (ATOM records): (download)
>1gh6B (B:)
mntiqqlmmilnsasdqpsenlisyfnnctvnpkesilkrvkdigyifkekfakavgagc
vaigsqryklgvrlyyrvmesmlkseeerlsiqnfskllndnifhmsllacalevvmaty
srsttdlsfpwilnvlnlkafdfykviesfikaegnltremikhlercehrimeslawls
dsplfdlikqsklvprgstslslfykkvyrlaylrlntlcerllsehpelehiiwtlfqh
tlqneyelmrdrhldqimmcsmygickvknidlkfkiivtaykdlphavqetfkrvlike
eeydsiivfynsvfmqrlktnilqya