PDB entry 1ggm

View 1ggm on RCSB PDB site
Description: glycyl-tRNA synthetase from thermus thermophilus complexed with glycyl-adenylate
Class: ligase
Keywords: aminoacyl-tRNA synthase, ligase(synthetase), ligase
Deposited on 1999-01-27, released 1999-01-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-30, with a file datestamp of 2019-10-25.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycine--tRNA ligase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: glyQS, glyS, TTHA0543
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56206 (0-94)
      • conflict (0)
      • conflict (90-94)
    • Uniprot P56206 (95-441)
      • conflict (106-109)
      • conflict (112-117)
      • conflict (145)
      • conflict (219-220)
      • conflict (238-239)
      • conflict (246)
    Domains in SCOPe 2.08: d1ggma1, d1ggma2
  • Chain 'B':
    Compound: Glycine--tRNA ligase
    Species: Thermus thermophilus [TaxId:300852]
    Gene: glyQS, glyS, TTHA0543
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56206 (0-94)
      • conflict (0)
      • conflict (90-94)
    • Uniprot P56206 (95-441)
      • conflict (106-109)
      • conflict (112-117)
      • conflict (145)
      • conflict (219-220)
      • conflict (238-239)
      • conflict (246)
    Domains in SCOPe 2.08: d1ggmb1, d1ggmb2
  • Heterogens: GAP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ggmA (A:)
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnakarywtppryfnmmfqdlrgprggrglla
ylrpetaqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmeieyf
vrpgedeywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfphgsl
elegiaqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviepsag
vdrgvlallaeaftreelpngeerivlklkpqlapikvaviplvknrpeiteyakrlkar
llalglgrvlyedtgnigkayrrhdevgtpfavtvdydtigqskdgttrlkdtvtvrdrd
tmeqirlhvdelegflrerlrw

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1ggmB (B:)
aassldelvalckrrgfifqsseiygglqgvydygplgvelknnlkqawwrrnvyerddm
egldasvlthrlvlhysgheatfadpmvdnakarywtppryfnmmfqdlrgprggrglla
ylrpetaqgifvnfknvldatsrklgfgiaqigkafrneitprnfifrvrefeqmeieyf
vrpgedeywhrywveerlkwwqemglsrenlvpyqqppessahyakatvdilyrfphgsl
elegiaqrtdfdlgshtkdqealgitarvlrnehstqrlayrdpetgkwfvpyviepsag
vdrgvlallaeaftreelpngeerivlklkpqlapikvaviplvknrpeiteyakrlkar
llalglgrvlyedtgnigkayrrhdevgtpfavtvdydtigqskdgttrlkdtvtvrdrd
tmeqirlhvdelegflrerlrw