SCOPe 2.07: Structural Classification of Proteins

PDB entry 1ggf

View 1ggf on RCSB PDB site
Description: crystal structure of catalase hpii from escherichia coli, variant his128asn, complex with hydrogen peroxide.
Class: oxidoreductase
Keywords: beta barrel, alpha helical domain, flavodoxin like domain, oxidoreductase
Deposited on 2000-08-21, released 2000-08-30
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: 0.185
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: catalase hpii
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P21179 (Start-752)
  - engineered (127)
Domains in SCOPe 2.07: d1ggfa1, d1ggfa2
Chain 'B':
Compound: catalase hpii
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P21179 (Start-752)
  - engineered (127)
Domains in SCOPe 2.07: d1ggfb1, d1ggfb2
Chain 'C':
Compound: catalase hpii
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P21179 (Start-752)
  - engineered (127)
Domains in SCOPe 2.07: d1ggfc1, d1ggfc2
Chain 'D':
Compound: catalase hpii
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
- Uniprot P21179 (Start-752)
  - engineered (127)
Domains in SCOPe 2.07: d1ggfd1, d1ggfd2
Heterogens: HEM, PEO, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1ggfA (A:)
msqhneknphqhqsplhdsseakpgmdslapedgshrpaaeptppgaqptapgslkapdt
rneklnsledvrkgsenyalttnqgvriaddqnslragsrgptlledfilrekithfdhe
riperivnargsaahgyfqpykslsditkadflsdpnkitpvfvrfstvqggagsadtvr
dirgfatkfyteegifdlvgnntpiffiqdahkfpdfvhavkpephwaipqgqsahdtfw
dyvslqpetlhnvmwamsdrgiprsyrtmegfgihtfrlinaegkatfvrfhwkplagka
slvwdeaqkltgrdpdfhrrelweaieagdfpeyelgfqlipeedefkfdfdlldptkli
peelvpvqrvgkmvlnrnpdnffaeneqaafhpghivpgldftndpllqgrlfsytdtqi
srlggpnfheipinrptcpyhnfqrdgmhrmgidtnpanyepnsindnwpretppgpkrg
gfesyqervegnkvrerspsfgeyyshprlfwlsqtpfeqrhivdgfsfelskvvrpyir
ervvdqlahidltlaqavaknlgieltddqlnitpppdvnglkkdpslslyaipdgdvkg
rvvaillndevrsadllailkalkakgvhakllysrmgevtaddgtvlpiaatfagapsl
tvdavivpcgniadiadngdanyylmeaykhlkpialagdarkfkatikiadqgeegive
adsadgsfmdelltlmaahrvwsripkidkipa

Sequence, based on observed residues (ATOM records): (download)

>1ggfA (A:)
dslapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgv
riaddqnslragsrgptlledfilrekithfdheriperivnargsaahgyfqpykslsd
itkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpif
fiqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsy
rtmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweai
eagdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaen
eqaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrd
gmhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyys
hprlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgiel
tddqlnitpppdvnglkkdpslslyaipdgdvkgrvvaillndevrsadllailkalkak
gvhakllysrmgevtaddgtvlpiaatfagapsltvdavivpcgniadiadngdanyylm
eaykhlkpialagdarkfkatikiadqgeegiveadsadgsfmdelltlmaahrvwsrip
kidkipa

Chain 'B':
Sequence, based on SEQRES records: (download)

>1ggfB (B:)
msqhneknphqhqsplhdsseakpgmdslapedgshrpaaeptppgaqptapgslkapdt
rneklnsledvrkgsenyalttnqgvriaddqnslragsrgptlledfilrekithfdhe
riperivnargsaahgyfqpykslsditkadflsdpnkitpvfvrfstvqggagsadtvr
dirgfatkfyteegifdlvgnntpiffiqdahkfpdfvhavkpephwaipqgqsahdtfw
dyvslqpetlhnvmwamsdrgiprsyrtmegfgihtfrlinaegkatfvrfhwkplagka
slvwdeaqkltgrdpdfhrrelweaieagdfpeyelgfqlipeedefkfdfdlldptkli
peelvpvqrvgkmvlnrnpdnffaeneqaafhpghivpgldftndpllqgrlfsytdtqi
srlggpnfheipinrptcpyhnfqrdgmhrmgidtnpanyepnsindnwpretppgpkrg
gfesyqervegnkvrerspsfgeyyshprlfwlsqtpfeqrhivdgfsfelskvvrpyir
ervvdqlahidltlaqavaknlgieltddqlnitpppdvnglkkdpslslyaipdgdvkg
rvvaillndevrsadllailkalkakgvhakllysrmgevtaddgtvlpiaatfagapsl
tvdavivpcgniadiadngdanyylmeaykhlkpialagdarkfkatikiadqgeegive
adsadgsfmdelltlmaahrvwsripkidkipa

Sequence, based on observed residues (ATOM records): (download)

>1ggfB (B:)
dslapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgv
riaddqnslragsrgptlledfilrekithfdheriperivnargsaahgyfqpykslsd
itkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpif
fiqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsy
rtmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweai
eagdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaen
eqaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrd
gmhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyys
hprlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgiel
tddqlnitpppdvnglkkdpslslyaipdgdvkgrvvaillndevrsadllailkalkak
gvhakllysrmgevtaddgtvlpiaatfagapsltvdavivpcgniadiadngdanyylm
eaykhlkpialagdarkfkatikiadqgeegiveadsadgsfmdelltlmaahrvwsrip
kidkipa

Chain 'C':
Sequence, based on SEQRES records: (download)

>1ggfC (C:)
msqhneknphqhqsplhdsseakpgmdslapedgshrpaaeptppgaqptapgslkapdt
rneklnsledvrkgsenyalttnqgvriaddqnslragsrgptlledfilrekithfdhe
riperivnargsaahgyfqpykslsditkadflsdpnkitpvfvrfstvqggagsadtvr
dirgfatkfyteegifdlvgnntpiffiqdahkfpdfvhavkpephwaipqgqsahdtfw
dyvslqpetlhnvmwamsdrgiprsyrtmegfgihtfrlinaegkatfvrfhwkplagka
slvwdeaqkltgrdpdfhrrelweaieagdfpeyelgfqlipeedefkfdfdlldptkli
peelvpvqrvgkmvlnrnpdnffaeneqaafhpghivpgldftndpllqgrlfsytdtqi
srlggpnfheipinrptcpyhnfqrdgmhrmgidtnpanyepnsindnwpretppgpkrg
gfesyqervegnkvrerspsfgeyyshprlfwlsqtpfeqrhivdgfsfelskvvrpyir
ervvdqlahidltlaqavaknlgieltddqlnitpppdvnglkkdpslslyaipdgdvkg
rvvaillndevrsadllailkalkakgvhakllysrmgevtaddgtvlpiaatfagapsl
tvdavivpcgniadiadngdanyylmeaykhlkpialagdarkfkatikiadqgeegive
adsadgsfmdelltlmaahrvwsripkidkipa

Sequence, based on observed residues (ATOM records): (download)

>1ggfC (C:)
dslapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgv
riaddqnslragsrgptlledfilrekithfdheriperivnargsaahgyfqpykslsd
itkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpif
fiqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsy
rtmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweai
eagdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaen
eqaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrd
gmhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyys
hprlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgiel
tddqlnitpppdvnglkkdpslslyaipdgdvkgrvvaillndevrsadllailkalkak
gvhakllysrmgevtaddgtvlpiaatfagapsltvdavivpcgniadiadngdanyylm
eaykhlkpialagdarkfkatikiadqgeegiveadsadgsfmdelltlmaahrvwsrip
kidkipa

Chain 'D':
Sequence, based on SEQRES records: (download)

>1ggfD (D:)
msqhneknphqhqsplhdsseakpgmdslapedgshrpaaeptppgaqptapgslkapdt
rneklnsledvrkgsenyalttnqgvriaddqnslragsrgptlledfilrekithfdhe
riperivnargsaahgyfqpykslsditkadflsdpnkitpvfvrfstvqggagsadtvr
dirgfatkfyteegifdlvgnntpiffiqdahkfpdfvhavkpephwaipqgqsahdtfw
dyvslqpetlhnvmwamsdrgiprsyrtmegfgihtfrlinaegkatfvrfhwkplagka
slvwdeaqkltgrdpdfhrrelweaieagdfpeyelgfqlipeedefkfdfdlldptkli
peelvpvqrvgkmvlnrnpdnffaeneqaafhpghivpgldftndpllqgrlfsytdtqi
srlggpnfheipinrptcpyhnfqrdgmhrmgidtnpanyepnsindnwpretppgpkrg
gfesyqervegnkvrerspsfgeyyshprlfwlsqtpfeqrhivdgfsfelskvvrpyir
ervvdqlahidltlaqavaknlgieltddqlnitpppdvnglkkdpslslyaipdgdvkg
rvvaillndevrsadllailkalkakgvhakllysrmgevtaddgtvlpiaatfagapsl
tvdavivpcgniadiadngdanyylmeaykhlkpialagdarkfkatikiadqgeegive
adsadgsfmdelltlmaahrvwsripkidkipa

Sequence, based on observed residues (ATOM records): (download)

>1ggfD (D:)
dslapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgv
riaddqnslragsrgptlledfilrekithfdheriperivnargsaahgyfqpykslsd
itkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpif
fiqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsy
rtmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweai
eagdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaen
eqaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrd
gmhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyys
hprlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgiel
tddqlnitpppdvnglkkdpslslyaipdgdvkgrvvaillndevrsadllailkalkak
gvhakllysrmgevtaddgtvlpiaatfagapsltvdavivpcgniadiadngdanyylm
eaykhlkpialagdarkfkatikiadqgeegiveadsadgsfmdelltlmaahrvwsrip
kidkipa